Rhodoferax sediminis CHu59-6-5: EUB48_04720
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Entry
EUB48_04720 CDS
T06165
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EUB48_04720 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhf01007
]
EUB48_04720 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhf03016
]
EUB48_04720 (aspS)
03029 Mitochondrial biogenesis [BR:
rhf03029
]
EUB48_04720 (aspS)
Enzymes [BR:
rhf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
EUB48_04720 (aspS)
Amino acid related enzymes [BR:
rhf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
EUB48_04720 (aspS)
Transfer RNA biogenesis [BR:
rhf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EUB48_04720 (aspS)
Prokaryotic type
Other AARSs
EUB48_04720 (aspS)
Mitochondrial biogenesis [BR:
rhf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
EUB48_04720 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
S5p_N
Motif
Other DBs
NCBI-ProteinID:
QDL36677
UniProt:
A0A515D8H4
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All DBs
Position
981722..983557
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AA seq
611 aa
AA seq
DB search
MVMRSHYCGLVTEALMGQTVSLCGWVNRRRDHGGVIFVDLRDREGYVQVVCDPDRAAMFE
TAEGLRNEFCIQVKGLVRARPEGTINEHLKSGKIEVLCHELTVLNPSVTPPFQLDDDNLS
ETTRLTHRVLDLRRPYMQNNLMLRYKTAMEVRKFLDAHGFIDIETPMLGKSTPEGARDYL
VPSRVHAGTFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETS
FLAEQEIRDLFQDMISTVFKNTLNVDLGEFPVMAYAQAMHRYGSDKPDLRVKLELTELTD
VMADVDFKVFSGAANMKGGRVVALRIPGGAREAGGLSRGEIDGYAEFVKIYGAKGLAYIK
VNEQAKGPGDKALRWPGLQSPIVKNIHDQAIAQILARTGAQDGDLIFFGADKVKVVNDAM
GALRLKIGLSEFGRKNGLFEAGWRPMWVVDFPMFEFDDEAQRYTAVHHPFTAPKDGHEDW
MVTAPEKCIAKGYDMVLNGWEIGGGSVRIHQADVQQKVFDALKIGPEEAQQKFGFLLDAL
QYGAPPHGGLAFGLDRIVTLMTGADSIRDVIAFPKTQRAQDLLTQAPTPVDEKQLRELHI
KLRSSDLVKPE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgcgttcccactattgcggtcttgtgaccgaggccctgatgggccaaaccgtt
tccctatgcggctgggtgaaccgccggcgcgaccacggcggtgtgatttttgtcgacttg
cgcgaccgcgaaggctacgtgcaagtggtgtgcgacccggatcgcgccgcgatgttcgag
actgccgaaggcctgcgcaacgaattttgcattcaggtcaagggcctggtgcgcgcgcgc
cccgaaggcaccatcaacgagcacctcaagagcggcaagatcgaggtgctgtgccacgag
ctcacggtcctgaacccgtccgtgacgccgccgttccagctcgatgacgacaacctgtcc
gagaccacgcgcctgacgcaccgtgtgctggacctgcgccgtccgtacatgcagaacaac
ctgatgttgcgctacaaaaccgcgatggaggtgcgcaagtttctcgatgcccatggcttc
atcgacatcgaaaccccgatgctgggaaagtccacgcccgaaggcgcgcgcgactacctg
gtgccctcgcgcgtgcacgccggcacgttctttgcgctgccgcaaagccctcagctgttc
aagcagttgctgatggtggccgggttcgatcgctactaccagatcaccaagtgcttccgc
gacgaagacctgcgcgccgaccgccagcccgagttcacgcagatcgatatcgagacctcg
ttcctggccgagcaggaaatccgcgacctgttccaggacatgatcagtaccgtcttcaag
aacaccttgaacgttgatttgggcgaattcccggtgatggcgtatgcacaggccatgcac
cgctacggctccgacaagccggacctgcgcgtcaagctcgaattgaccgagctgaccgac
gtgatggccgacgtggacttcaaggtcttttccggcgctgccaacatgaagggcgggcgc
gtggtggccctgcggattccgggcggcgccagggaggccggtggcctctcccgcggcgag
atcgacggctacgccgagttcgtcaagatttacggcgccaaggggctggcctacatcaag
gtcaacgagcaggccaaaggcccgggcgacaaggcccttcggtggccgggcctgcaaagc
ccgatcgtcaagaacattcacgaccaggctattgcgcagattctggcgcgcacgggtgcg
caggacggcgacctgattttcttcggtgcggacaaggtcaaggtcgtcaacgacgccatg
ggcgccctgcgcctgaagattggcctgagcgagttcggcaggaagaacggcctgttcgag
gccggctggcggccgatgtgggtggtggacttcccgatgttcgagttcgacgacgaggct
cagcgctacaccgcggtgcaccacccgtttaccgcgcccaaggacggtcatgaagactgg
atggtgaccgcgcccgagaaatgcatcgccaagggctacgacatggtgctcaacggctgg
gaaatcggcggcggctcggtgcgtatccaccaggccgacgtgcagcaaaaggtgttcgac
gcgctgaagatcggccccgaagaggcccagcaaaaatttggattcctgctcgatgcgctg
caatacggtgcgccaccgcacggtggcctggcgttcggtctggaccgcatcgtcacgctc
atgacaggagccgactcgattcgcgacgtgatcgccttccccaagacccagcgcgcgcag
gatctgctgacgcaggcgcccacgcccgtggacgagaagcagctgcgcgagttgcacatc
aagctcaggagcagtgacctggtcaagccggagtga
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