Rheinheimera sp. D18: E0Z06_02240
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Entry
E0Z06_02240 CDS
T05923
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhh
Rheinheimera sp. D18
Pathway
rhh03420
Nucleotide excision repair
rhh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E0Z06_02240
03430 Mismatch repair
E0Z06_02240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhh03400
]
E0Z06_02240
Enzymes [BR:
rhh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E0Z06_02240
DNA repair and recombination proteins [BR:
rhh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E0Z06_02240
MMR (mismatch excision repair)
Other MMR factors
E0Z06_02240
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_11
LAGLIDADG_1
DEAD
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QBL08417
UniProt:
A0A4P6VNB2
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All DBs
Position
complement(459482..461281)
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AA seq
599 aa
AA seq
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MFTWQPTELTPEQTAAVLHPESVFLVACPGSGKTRTLTYKIAYELSMIQSRRKFVIAITY
TNRAADEIKERVESLGIRTEQLWIGTIHSFCLEWIVKPYHIYEESIASGFRIIDSHEKEK
LLESLCKPYQKDKITHYDCDYYVNDNGYHLICPDNKKHAFIHEILREYFNQLAMQKQIDF
ELLLWSARSLCKENPEINLTLSLLFSVILVDEYQDTKKIQYGILAGILKAGNGNTRLFMV
GDPNQAIFGSLGGYPILLPELINITNLSIKNFALTENFRSSENIIKYFNNYNLYKTNIVA
AGKDRSYPSIICYDDLIHRDSLVHEIIKIIRFNIDILNIKPDEICVVAPQWVHLASMTRQ
LVVNMPEQSFDGPGMVPFARDIENYWYKVSKLALTLPSPENYVRRLRWAAEIIKDFNDIG
IYLPKLSSRELLRLCNSIQPIEQDGLNFLKRFFIELLDHLGIELIFFKQLNEHFDAFFDS
STSRIERLEKEGITGIRDINFFRKVFQNRTGITVSTIHGVKGAEFDVVISYALLEGMVPH
FNDPDGSDSAKKLLYVIGSRARKNLYLFSETGRSRGRYNMYTPTEVLNSCVFFYSQKPI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgttcacttggcagcctactgagttaacgccggagcaaactgctgcagttctccatcca
gagagcgtattcctagttgcctgccctggcagcggcaaaacccgcactttgacttataaa
attgcttatgaactatctatgattcaatcaaggaggaagtttgtaatagcaataacatat
acgaatagggctgctgacgaaataaaagaaagagtagagtcattaggaattagaacggag
caactttggattggaactatccattctttctgtcttgagtggatagtcaagccataccat
atttatgaggaaagcattgcatctggattcagaataatcgactctcatgaaaaagaaaaa
ttattagaatcactttgcaaaccttaccaaaaggacaagattacacattatgattgcgat
tattatgttaatgataatggctatcatttaatttgccctgacaacaaaaaacatgcattc
atccatgaaatacttagagaatacttcaatcaattagcaatgcaaaaacaaattgatttt
gagcttcttctttggtccgcaagatcgctatgtaaagaaaatcctgaaattaatcttact
ttatctttacttttctcagtaatactggtggatgaataccaagatactaaaaaaattcaa
tatggaatacttgctggaattttaaaggctggcaacggtaacaccagattatttatggtt
ggagatccaaatcaggcgattttcggttctttaggtggttaccctattctactccccgaa
ctgatcaatataacaaatttgtcgataaagaattttgcacttacagaaaattttaggtca
tctgaaaatataattaaatattttaataactataacttgtataagactaatatagtcgcc
gcaggcaaggacagatcataccctagtataatttgctacgacgatttaattcatcgcgat
tctctagtgcatgaaataattaaaataatccgatttaatatagatattctcaatattaag
ccagatgaaatttgtgtagttgctcctcaatgggttcatctagcgtcaatgacaagacag
ttagtagtgaatatgcctgaacagtcatttgacggtccaggaatggtgccattcgcgaga
gatatcgagaattattggtacaaagtttcgaaactagctttaacacttccatcaccggag
aattatgttcgtcgattgcggtgggccgcagagattatcaaagattttaatgatattggg
atttatttgccaaagctttcatcaagagaattactgaggctatgcaactcaattcaacct
atagagcaagatggactaaattttctgaagagatttttcattgaattattagatcatctt
ggaattgaattgatctttttcaagcaactaaacgaacactttgacgcattttttgatagt
tcaacctcgagaattgaaaggttagagaaagaaggtattactggtataagagatataaat
ttttttagaaaagtttttcaaaatagaacgggcataactgtctcaactattcatggcgtt
aaaggtgctgaatttgatgttgttatttcttacgctttactagaaggaatggttcctcat
tttaatgatccagatggcagcgactcagcaaagaaattactttatgtcattggctcaaga
gcgagaaaaaatctttatctattttcggagactggccgtagtagagggcgatacaatatg
tacacaccaactgaagtactgaacagttgtgtattcttctatagccaaaagcctatttag
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