Sinorhizobium fredii NGR234: NGR_a03520
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Entry
NGR_a03520 CDS
T00888
Symbol
rmlC
Name
(GenBank) dTDP-rhamnose 3,5-epimerase RmlC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00521
Streptomycin biosynthesis
rhi00523
Polyketide sugar unit biosynthesis
rhi00541
O-Antigen nucleotide sugar biosynthesis
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01250
Biosynthesis of nucleotide sugars
Module
rhi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NGR_a03520 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NGR_a03520 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NGR_a03520 (rmlC)
Enzymes [BR:
rhi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NGR_a03520 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AAB91686
UniProt:
P55468
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Position
pNGR234a:449037..449624
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AA seq
195 aa
AA seq
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MGGTELDEMYFQSLSIAEVKLIRPRKFGDCRGYFSEVFREKWFRKNVADVGLVQDNESLS
AQIGTVRGLHFQLEPFAQGKLVRCTRGALFDVAVDVRVGSPTYGKWVSAELSQENGAQLW
VPAGFAHGFMTLKADTVISYKVTAPYSAEHDRGLKWDDPAIGINWPKMTTYVLSEKDSSQ
PSLCELPVSFQYVKV
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgggcggaactgagttggacgaaatgtattttcaaagcctgtcgatagccgaagtcaag
ttaattaggcctaggaagtttggcgattgccgcggctatttcagcgaagtattcagggaa
aaatggttccgcaaaaatgttgccgatgtcggacttgttcaggataatgaatcactctcc
gctcagatcgggacggtaaggggccttcactttcagctcgagcctttcgcgcaaggaaag
cttgtccgctgtacacgcggcgcgctgttcgacgtcgcggtggacgtcagggtcgggtca
ccaacatacgggaaatgggtttccgccgagctatctcaggaaaatggcgcgcagctttgg
gttcctgcgggcttcgcgcatggtttcatgacgcttaaggcggacacggtaatcagctac
aaggtgacagcgccctatagcgctgaacatgatcgcggactgaaatgggacgatcccgcc
atcggaatcaattggccaaagatgaccacgtacgttctgtcggaaaaggactccagtcag
ccatcactctgcgaacttccggtctcgtttcaatacgtgaaggtgtag
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