Sinorhizobium fredii NGR234: NGR_b20420
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Entry
NGR_b20420 CDS
T00888
Symbol
gcl
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00630
Glyoxylate and dicarboxylate metabolism
rhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NGR_b20420 (gcl)
Enzymes [BR:
rhi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
NGR_b20420 (gcl)
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Motif
Pfam:
TPP_enzyme_C
TPP_enzyme_M
TPP_enzyme_N
S1-P1_nuclease
Motif
Other DBs
NCBI-ProteinID:
ACP23489
UniProt:
C3KM53
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Position
pNGR234b:complement(2088233..2090017)
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AA seq
594 aa
AA seq
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MAKMRAVDAAVHVLEKEGVDCAFGVPGAAINPLYSALRARGSIRHVLARHVEGASHMAEG
YTRAKHGNIGICIGTSGPAGTDMITGLYSASADSIPILCITGQAPRARLDKEDFQAVDIA
AIAGPVTKWAVTVMEPALVPFVFQKAFHLMRSGRPGPVLIDLPVDVQLAEIEFDPETYEP
LAPYKPAATRAQAEKALAMLNASERPLIVAGGGIINADASDLLTEFAEITGVPVIPTLMG
WGTIPDDHPLMAGMCGLQTSHRYGNATLLASDFVFGIGNRWANRHTGNVPTYTEGRKFIH
VDIEPTQIGRVFAPDFGIVSDAAAALKLFLDVATEWKTAGKLRDWSAWADECRERKRTML
RKTHFDQTPLKPQRVYEEMNKAFGRDTCFVSTIGLSQIAGAQFLHVYRPRNWINCGQAGP
LGWTLPAALGVRAADPNRPIVALSGDYDFQFLIEELAVGAQHKLPYLHVVVNNSYLGLIR
QAQRGFEMDFEVSLAFDNINASGDAEKGYGVDHVAVAEGLGCKAIRVKSPNEFADAFERA
QALMEEHRVPVVIEFILERVTNIAMGADINAVVEFEELAARGEDAPTAIAALLD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatgcgtgctgtcgatgcagcggttcatgttctggaaaaggagggggtggat
tgcgctttcggcgttccgggtgcggcgatcaatccgctctattcggcactccgggcgcgc
ggatcgatccgccatgtccttgcccgacatgtcgaaggcgcctcgcatatggcggagggc
tatacgcgggcaaagcacggcaatattggcatctgcatcggtacgtcaggcccggccggc
accgacatgatcaccggcctctactcggcctcggccgattcgatcccgatcctctgcatc
accggccaggcgccgcgcgcccgcctcgacaaggaggatttccaggccgtcgacatcgcg
gcgatcgccgggccggtcacgaagtgggcggtcacggtcatggagccggcgctcgtcccc
ttcgtcttccagaaggcgttccacctgatgcgctcgggtcgtcccggcccggtgctgatc
gacctgccggtcgacgtccaactggccgaaatcgaattcgatccggagacctacgagccg
ctggcgccttataagcccgccgcgacgcgcgcccaggcggaaaaggcgctcgccatgctg
aacgcgtcggagcggccactgatcgtcgcgggcggcggcatcatcaatgcggatgcctcg
gatctcctcaccgaattcgccgagatcaccggcgttccggtcatcccgacgctgatgggc
tggggcacgatccccgacgaccatccgctgatggccgggatgtgcggcctgcagacctcg
caccgctacggcaatgcaacgctgcttgcctccgacttcgtcttcggcatcggcaaccgc
tgggccaaccgccacaccggcaacgtcccgacctatacggagggtcgcaaattcatccat
gtcgatatcgagccgacccagatcggccgcgttttcgcgccggatttcggcatcgtctcg
gatgcggcggcagcgctcaagctctttctcgacgtcgcgaccgaatggaagaccgccggc
aagctgcgcgattggtcggcctgggccgatgagtgccgcgagcgcaagcgcaccatgctg
cgcaagacgcatttcgaccagacgccgctgaaaccgcagcgcgtctatgaagaaatgaac
aaggccttcggccgcgacacctgcttcgtttcgaccatcggcctcagccagatcgccggc
gcgcagttcctgcatgtctatcgaccgcgcaattggatcaattgcggccaggccggtccg
ctcggctggaccctgccggcagcgctcggggtccgcgccgccgatcccaaccggccgatc
gtcgcgctttccggtgactacgacttccagttcctgatcgaggagcttgccgtcggggcg
cagcacaagctcccctacctgcatgtcgtcgtcaacaattcctatctcggcctgatccgc
caggcccagcgcggcttcgagatggatttcgaggtgagcctcgccttcgacaacatcaat
gcgagcggcgacgcggagaagggctacggcgtcgaccacgtggcggtcgccgaaggcctc
ggctgcaaggcgatccgcgtcaagagccccaacgaattcgccgatgccttcgagcgggcg
caggcgctgatggaggaacaccgggtgccggtcgtcatcgagttcatcctcgagcgtgtc
accaacatcgccatgggcgccgacatcaacgcggtggtcgagttcgaggagcttgccgca
cgcggcgaggacgcgccgaccgcgatcgccgccctgctcgactga
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