Rhizobium sp. Kim5: Kim5_CH00932
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Entry
Kim5_CH00932 CDS
T05501
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Kim5_CH00932 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhk03400
]
Kim5_CH00932 (tag)
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Kim5_CH00932 (tag)
DNA repair and recombination proteins [BR:
rhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Kim5_CH00932 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
DUF4597
HTH_21
Motif
Other DBs
NCBI-ProteinID:
ARQ57038
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All DBs
Position
936284..936913
Genome browser
AA seq
209 aa
AA seq
DB search
MSATGIIIGEDGKSRCHWHANLPDYLKYHDEEWGRPVTNDIRLFEKICLEGFQSGLSWLT
ILRKRENFRAAFVGFDFDKVALFGEAHVDRCLADAGIIRHRGKIVSTINNARRAIALRDE
FGSLAHYFWRYEPGHNERPAVVDREHIVANPTTPTSVVISKDLKKRGWTFVGPTTVYAFM
QAMGLVNDHLEGCFCRPEVEAMRAALVRP
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgactggcatcattatcggcgaggacggcaagagccgctgccactggcacgcc
aatctgcccgattatctcaaatatcatgacgaggaatggggccgtcctgttaccaacgac
attcgcctcttcgagaagatctgcctcgaaggcttccagtccggcctttcctggctgacc
atcctgcgcaagcgggagaatttccgtgccgcctttgtcggcttcgatttcgacaaggtg
gcgctattcggcgaggcgcatgtcgatcgttgccttgccgatgccggcatcatccgccat
cgcggcaagattgtttcgaccatcaacaatgccaggcgcgccattgcgctacgagacgaa
ttcggctcgctcgcccattatttctggcgctacgagccgggccataacgagcggccggcg
gtagtcgaccgcgagcatatcgtcgccaatccgacgacgccgacctcggtggtcatttcg
aaggatctgaagaagcgtggctggacctttgtcggcccgaccacagtttatgctttcatg
caggcaatgggtctcgtcaatgatcatctcgagggctgcttctgccggcccgaggtcgag
gcgatgcgcgccgccctggttcgaccatga
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