Rhizobium sp. Kim5: Kim5_CH01644
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Entry
Kim5_CH01644 CDS
T05501
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00521
Streptomycin biosynthesis
rhk00523
Polyketide sugar unit biosynthesis
rhk00541
O-Antigen nucleotide sugar biosynthesis
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01250
Biosynthesis of nucleotide sugars
Module
rhk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Kim5_CH01644 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Kim5_CH01644 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Kim5_CH01644 (rfbC)
Enzymes [BR:
rhk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Kim5_CH01644 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ARQ57737
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Position
complement(1658947..1659525)
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AA seq
192 aa
AA seq
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MRIETVAIQGIVAITPPRFGDHRGYFSEVFKDAWFRENVADVMFVQDNESLSAQAGTVRG
LHFQIPPFAQGKLVRCLAGRIMDVVVDIRVGSPSFGNWLSQELSPDTGKQLWIPPGFAHG
FATIEPNSVISYKVTAPYSPQHDRGIAWNDPAIGIRWPFDERDMISSDKDKTLPRLADLP
SHFSYSAQQPQD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgagactgtggccatccagggcatcgttgcaatcacgccgccacgcttcggc
gatcatcgcggctatttctccgaggtgttcaaggatgcctggttccgggaaaatgtggcc
gacgtcatgttcgtccaggacaatgaatcgctttcggcgcaggccggcaccgtccggggg
ctgcatttccagatcccgcccttcgcacagggcaagctggtgcgctgccttgccggccgg
atcatggatgtcgtcgtcgatatccgcgtgggatcacctagcttcggcaattggctctct
caggagctctcgccggacaccggcaaacagctctggataccgcccggcttcgcacacgga
ttcgcaacgatcgagccgaacagcgtcatcagctacaaggtaaccgcaccctatagcccg
caacatgatcggggcatcgcgtggaacgatccggcgatcggcattcgctggcccttcgat
gagagagacatgatatcgtccgacaaggacaagacgctgccgcggctcgcagatctgcca
agccacttttcctattcagcacagcaacctcaggattga
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