Rhizobium sp. Kim5: Kim5_CH04251
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Entry
Kim5_CH04251 CDS
T05501
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00020
Citrate cycle (TCA cycle)
rhk00270
Cysteine and methionine metabolism
rhk00620
Pyruvate metabolism
rhk00630
Glyoxylate and dicarboxylate metabolism
rhk00680
Methane metabolism
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01120
Microbial metabolism in diverse environments
rhk01200
Carbon metabolism
Module
rhk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhk_M00012
Glyoxylate cycle
rhk_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Kim5_CH04251 (mdh)
00620 Pyruvate metabolism
Kim5_CH04251 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
Kim5_CH04251 (mdh)
09102 Energy metabolism
00680 Methane metabolism
Kim5_CH04251 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Kim5_CH04251 (mdh)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
Kim5_CH04251 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
DUF357
Motif
Other DBs
NCBI-ProteinID:
ARQ60242
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Position
complement(4301495..4302457)
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AA seq
320 aa
AA seq
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MARNKIALIGSGMIGGTLAHLAGLKELGDIVLFDIADGIPQGKGLDIAQSSPVEGFDANL
TGASDYSAIEGADVCIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPNAFVICIT
NPLDAMVWALQKFSGLPANKVVGMAGVLDSSRFRLFLAKEFNVSVQDVTAFVLGGHGDTM
VPLARYSTVGGIPLTDLVTMGWVTKERLEEIIQRTRDGGAEIVGLLKTGSAYYAPAASAI
EMAESYLKDKKRVLPCAAHLTGQYGVKDMYVGVPTVIGAGGVERVIEIDLNKTEKEAFDK
SVGAVAGLCEACINIAPALK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaacaagatcgcactcattggttctggcatgattggtggcacgctggcgcat
ctcgccggcttgaaggaactgggcgatatcgtcctcttcgacatcgccgatggcattccc
cagggcaagggcctcgatatcgcacagtcctctccggtcgaaggcttcgacgccaatctg
accggcgccagcgactattccgccatcgaaggcgctgacgtctgcatcgtcaccgctggc
gttccgcgcaagccgggcatgagccgcgacgatcttctcggcatcaacctcaaggtcatg
gagcaggtcggcgccggcatcaagaaatatgcgccgaatgccttcgtcatctgcatcacc
aacccgctcgacgccatggtctgggcgctgcagaagttttccggccttcccgccaacaag
gtcgtcggcatggccggcgttctcgactcctcgcgtttccgcctcttcctcgccaaggaa
ttcaacgtttccgtccaggacgtgacggccttcgttctcggcggccacggcgacacgatg
gtgccgctcgcccgctattcgaccgtcggcggcattccgctcaccgatctcgtcaccatg
ggctgggtcaccaaggagcgcctggaagagatcatccagcgcacccgtgacggcggtgcc
gaaatcgtcggcctgctgaagaccggctcggcctattacgctccggccgcctcggcgatc
gagatggccgaatcctacctcaaggacaagaagcgcgttctgccctgcgctgcccatctc
accggccagtacggcgtcaaggacatgtatgtcggcgttcccaccgtcatcggcgccggc
ggcgtcgagcgcgtcatcgagatcgacctcaacaagaccgagaaggaagccttcgacaag
tccgtcggcgccgtcgccggtctttgcgaagcctgcatcaacatcgcgcccgccctcaag
taa
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