Rhizobium favelukesii: LPU83_2700
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Entry
LPU83_2700 CDS
T03046
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03420
Nucleotide excision repair
rhl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPU83_2700 (uvrD)
03430 Mismatch repair
LPU83_2700 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_2700 (uvrD)
Enzymes [BR:
rhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPU83_2700 (uvrD)
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPU83_2700 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LPU83_2700 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CDM58352
UniProt:
W6RAP5
LinkDB
All DBs
Position
2635928..2638591
Genome browser
AA seq
887 aa
AA seq
DB search
MFSDVYEGCGTAGNDSRLTCRQFAAVAALSRQIQAEDSHPTGNESRTSFLVFPSRITTLR
AMSNSFDDIPFFDEEPGEPPRKQPTPAASAAGGLAARAMAARDGGKRPDYLSGLNPEQTE
AVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKERIAV
LVGGAVEGMPWLGTFHSIGVRLLRRHAEMVGLRSDFTILDTDDVVRLIKQLIQAEGLDDK
RWPAKQFAGMIDTWKNKGLGPGDIAEGDARAFANGKGRELYVAYQQRLSTLNACDFGDLL
MHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRPKGEPQNVCCVGDD
DQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTAHILGAAGHLIAHNEGRLGKTLF
TDRSDPEDIKVQVHASWDSEVEAREIGEEIEQLQRGNPDGKRHLLNDMAILVRASFQMRE
FEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQPADDLAFERIINTPKRGLGDTT
VRALHDYARARDIPMLAAAADMIETDELKPKARKALFDVVQSFRRWQEMLENTPHTELAE
QILEESGYTDMWKNDKSADAPTRLENLKELIRSMESFESMRGFLEHVSLVMDAEQNENLD
AVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKHRC
HIWFVSNRRIHGLWQSTIPSRFLDELPETHVEVAEAEQSYGGYGRGGYGQSRFDKADPFA
NSYSTPGWKRAQQNKTDATRDNWGTRSGHAVERIGYGESGPRGRTIDGELVAKSTATEPS
KFKTGDRVFHLKFGNGNIIEIEGNKLTIDFDRAGQKRVLDGFVERVS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
ttgttttctgacgtttatgagggatgcggtaccgccgggaacgattctcgtctcacatgc
cggcaattcgctgccgttgctgccctctcacgccagatacaagctgaggacagccatccg
accgggaatgaaagcagaacatcttttctggtctttccatcccgaatcactacattacgc
gccatgagcaatagtttcgacgatatccccttcttcgatgaagagccgggcgagccgccg
cgcaagcagccgacccctgccgcttccgccgccggagggctcgccgcccgggccatggcc
gctcgagatggcggcaagcgccccgattacctttccggcttgaaccccgagcagaccgaa
gccgtcgaaacgctggaaggccccgtcctcgtgctcgcgggcgcaggcactggcaagaca
cgtgtcctcacgacgcgcattgcccatatcctcaacaccggccgcgcattcccctcgcag
atcctcgccgtcaccttcaccaacaaggctgcccgcgagatgaaggagcgcattgccgtt
ctcgtcggcggtgctgttgagggcatgccatggctcggcaccttccactcgatcggcgtg
aggcttctgcgccgccatgccgaaatggtcggcctgcgctccgacttcacgattctcgat
accgacgacgtcgtccgtctgatcaagcagctcatccaggcggaaggtctcgatgacaag
cgatggcctgccaagcagttcgccggcatgatcgacacctggaagaacaagggcctcggc
cccggcgacatcgcggaaggcgacgcacgcgccttcgccaacggcaagggccgcgaactt
tacgtcgcctaccagcaacggctttcgacgctgaacgcctgcgatttcggcgatctcttg
atgcacccgatcgcgattttccggaagaacccggatcttctgaaggagtatcacggccgc
tttcgctacatcctcgtcgacgaatatcaggacaccaacaccgcccagtatatgtggctg
cggctgctcgcgcagcgccccaagggtgagccgcagaacgtttgctgcgtcggcgacgac
gaccagtcgatctatgggtggcgcggcgccgaggtggacaacatcctgcgcttcgaaaag
gatttcccgggcgccaaggtcatcaagctggagcgcaactaccgttcgacggcgcatatc
ctcggtgcggccggccacctgatcgctcacaacgaaggccgcctcggcaagacgctcttc
actgatcggagcgatcccgaagacatcaaggtccaggtgcacgcctcctgggattccgaa
gtggaagccagggaaatcggcgaggaaatcgagcagcttcagcgcggcaatcccgatggc
aagcggcatctgctgaacgacatggcgatcctcgtgcgcgcctccttccagatgcgcgaa
ttcgaagaccgcttcgtgacgttgggcctcaactaccgcgtgattggcggcccgcgcttc
tacgagcgcctcgaaatccgcgatgccatggcctatttccgcctcgtcgcacagcctgcc
gacgacctcgccttcgagcgcatcatcaacaccccgaagcgtggtctcggcgacaccacc
gtgcgcgcccttcacgattacgctcgcgcccgcgatattccgatgctggcggcagccgcc
gacatgatcgagaccgacgagttgaagccgaaggctcgcaaggccctcttcgacgtcgtc
caatccttccgccgctggcaggaaatgctggaaaatacgccccataccgagcttgccgag
cagattctcgaagagtcgggctataccgatatgtggaagaacgacaagtcggccgacgcg
ccgacccgtctcgaaaacctgaaggaactgatccgctcgatggaaagcttcgagtcgatg
cgcggctttctcgagcacgtctcgctggtcatggacgccgagcagaatgaaaatctcgac
gccgtctcgatcatgacgctgcattccgccaagggcctggagttcgacaccgtcttcctg
cccggctgggaggaaggtctcttcccccaccagcgttcgctcgatgaaagtggtcgcgcc
ggcctcgaagaagaacgccgcctcgcctatgtcggcatcacccgcgccaagcaccgctgc
cacatctggttcgtctccaaccgacggatccacggtctctggcaatccaccatcccgtcg
cgttttctcgatgaactaccggaaacgcatgtcgaagtggcggaagccgagcagagctac
ggcggctatggtcgcggcggctacggccaatcgcgcttcgataaggctgatcccttcgcc
aactcttattcgacgccgggctggaagcgcgcgcagcagaacaagacggacgccacccgc
gacaactggggcacccgttccggccacgctgtggagcgcatcggctacggcgaaagcggc
ccgcgcggccgcactatcgatggcgaactggtggcaaaatccacagcgaccgagccctcg
aaattcaagaccggagaccgcgtcttccacttgaaattcggcaacggcaacatcatcgag
atcgagggcaacaagctgaccatcgattttgaccgggctggccagaagagagtgctcgat
gggtttgtggagcgggtttcgtag
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