Rhizobium favelukesii: LPU83_pLPU83d0156
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Entry
LPU83_pLPU83d0156 CDS
T03046
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00521
Streptomycin biosynthesis
rhl00523
Polyketide sugar unit biosynthesis
rhl00541
O-Antigen nucleotide sugar biosynthesis
rhl01100
Metabolic pathways
rhl01110
Biosynthesis of secondary metabolites
rhl01250
Biosynthesis of nucleotide sugars
Module
rhl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LPU83_pLPU83d0156 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LPU83_pLPU83d0156 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LPU83_pLPU83d0156 (rmlC)
Enzymes [BR:
rhl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LPU83_pLPU83d0156 (rmlC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
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All DBs
Position
pLPU83d:complement(163164..163724)
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AA seq
186 aa
AA seq
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MKVKSLEIADVLLIEPTVYGDDRGFFFESFNQAQFSALVGQDLTFVQDNHSKSARGVLRG
LHYQIKQPQGKLVRVVDGEVFDVAVDLRKASPTFGKWVGETLSADNKRQLWIPAGFAHGF
LVLSESAQFLYKTTDFYSPENERAIIWNDPTLNIRWPIDTMPILSRKDAVAQAFPDAEVF
AGSLDS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaaagtcgctggagatcgctgacgtgttgctgatcgagccgacggtctatggc
gacgatcgcggctttttcttcgagagcttcaatcaggcgcagtttagtgcgcttgtcggt
caagatctcaccttcgtgcaggacaaccactccaaatcggcaaggggcgtgctgcgagga
ctgcactaccagatcaaacaaccgcagggaaaactggtgcgcgtcgtcgacggagaggtg
tttgacgttgccgtcgacctgcgcaaggcgtcgccgaccttcggcaaatgggtcggggaa
accctgtctgccgacaacaaacggcagctctggattccggccggtttcgcccacggcttt
cttgtgctttccgagtccgcgcagttcctctacaagaccacggatttctattcgccggag
aacgagcgggcgattatttggaatgatccgacgctgaacattcgctggccgatcgatacg
atgcccattctttcgaggaaggatgcggtggcgcaggcgttccctgatgcggaggtcttc
gccggttcactggattcttga
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