Rhizobium favelukesii: LPU83_pLPU83d0992
Help
Entry
LPU83_pLPU83d0992 CDS
T03046
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhl
Rhizobium favelukesii
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhl03032
]
LPU83_pLPU83d0992
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_pLPU83d0992
Enzymes [BR:
rhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LPU83_pLPU83d0992
DNA replication proteins [BR:
rhl03032
]
Prokaryotic type
DNA Topoisomerases
LPU83_pLPU83d0992
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPU83_pLPU83d0992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
LinkDB
All DBs
Position
pLPU83d:991710..992789
Genome browser
AA seq
359 aa
AA seq
DB search
MNQVLDKHLIDAAGEEVKLCTGLVYMPSLERGITRKQGKRGFLYYMPDGRRITDKNEVAR
LNALAIPPAYRDVVISTNPLSHLQAVGIDARDRKQYRYHTDWHAERGRAKFECLADFGSR
LPDIRERVDIDLRARGLTMDKALATIVWMLDNLYIRIGNANYADTNGSYGLTTLRNRHVK
IDGPSVRFRFRGKSGKEWNLVHSDRRIANVVRKLQELPGQKLFKYICDDGGCRQISSQDV
NAYIRDVAGDDFSSCQFRTWGATCMAASALALLDVATSERAIARQLNEVIDTVAAKLVNT
RSVCRTSYIHPAVFDDYRAGRLGDILKMRKTTSERLLRWMDDEEIRTLRWLKSRPVGGA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggtcctcgacaaacacctcatcgacgcagcgggagaggaagtgaaactctgc
accggcttggtgtacatgccgtcgctggagcgcggcatcacccgcaagcaaggcaagcgg
ggcttcctctactacatgccggatggacgtcggatcaccgacaagaacgaagtcgcacgc
ctaaacgcgcttgcaatcccgccagcctatcgcgacgtggttatctctaccaatcctctg
tcgcatctgcaggcggtgggtatcgatgcgcgtgatcgcaaacaataccgctatcatacc
gactggcatgccgaacgcggacgcgccaagtttgagtgtctcgccgacttcggctcgcgg
ctacccgatattcgcgagcgcgtcgatatcgatctgcgagcgcgggggctgacaatggac
aaagcgctggccaccatcgtttggatgctagacaacttgtacatccgcatcggcaacgcc
aactatgcggataccaacggttcctacggcctgacgacgctccgcaatcgccacgtcaag
atcgacggccccagcgtaaggtttcggttcaggggcaaatccggaaaagagtggaatctc
gtgcattccgaccgtcgtatcgccaacgtcgtgcgtaagcttcaggaactgccaggccag
aagctcttcaaatatatttgcgacgacggcggttgtcggcagatttcctcacaagacgtg
aacgcctacattcgcgacgttgcaggtgacgatttcagctcatgccaatttcggacatgg
ggtgccacctgtatggcagcatcggcgctcgctctgctcgacgttgcaacgtcagaacgt
gccatcgcgcgccagctcaacgaagtgatcgatactgtcgcggccaagcttgttaacacg
agatccgtctgcagaacatcctacattcatccggcggttttcgatgactatcgggccggt
cgtctcggcgatattctcaaaatgaggaaaaccacgagcgagcgtctgttgcgctggatg
gacgacgaggagatcaggacattgcgctggctcaaatcccgtcctgtcgggggcgcctga
DBGET
integrated database retrieval system
