KEGG   Rhizobium sp. N1341: AMJ98_CH00561
Entry
AMJ98_CH00561     CDS       T04420                                 
Name
(GenBank) DEAD/DEAH box type DNA/RNA helicase protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rhn  Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhn03400]
    AMJ98_CH00561
Enzymes [BR:rhn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AMJ98_CH00561
    5.6.2.6  RNA 3'-5' helicase
     AMJ98_CH00561
DNA repair and recombination proteins [BR:rhn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AMJ98_CH00561
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: ANL08284
LinkDB
Position
565574..568084
AA seq 836 aa
MDQIDSEASAQLPAAFTRWFAEKGWRPRAHQLELLARAEAGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGRIPPGSAFTGIHTLYVSPLKALAIDIERNLMKPVAEMGLPVTVENRTGDT
PNAKRQRQKLSPPDILLTTPEQVALLLANREAERFFKDLKYVVLDELHSLVTSKRGHMLS
LGLARLRRLAPDLKTIGLSATVAEPMDLQKWLVAQEEGKEHHAGLVVVEGGAKPDISILS
TDERIPWAGHSAKYAIPDVYRQLLDHKTTLLFVNTRSQAEMLFQELWTINDDNLPIALHH
GSLDVAQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRA
NHRMDEPSKAILVPANRFEVMECQAALDANYIGAQDTPPVGRGALDVLAQHVLGMACAEP
FDMLELYDEVTSASPYADLSWETFERVVDFVATGGYALRTYERYARIRKTKEGRWRVSNQ
AVAQQYRLNLGTIVESPMLNIRMVKRGEGGRIGRGGATLGKVEEYFLEQLSPGDTFIFSG
KVLRFEGIRENECLASQAFSLDPKIPAYNGGKFPLSTYLAEQVRGMIADPDRWRHLPDQV
RDWLSLQTDKSMLPKRDEFLIETFPRGSRGYMVAYPFEGRLAHQTLGMLLTRRLERAGAK
PLGFVATDYSLAVWGLEDMGLMIANGRLSLSDLFDADMLGDDLEAWLAESFLLKRTFRNC
AVIAGLIERRHPGKEKSGRQITVSADLIYDVLRSHEPDHILLQATRQDAATGLLDISRLG
DMLMRIRGHITHRPLDHISPLAVPVMLEIGREAVPGEAHDALLAEAADDLIAEALA
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggaccagatcgattccgaagccagcgcccagcttcctgccgcctttacccgctggttt
gcggaaaagggctggcgtccgcgcgcccatcagctggagctgcttgcccgcgccgaagcc
ggcgaaagcacgctgctgattgcgccgaccggcgccggcaagacgctggctggtttcctg
ccgtcgctcaccgatctcacccgccgcggccgcattccgcccggctccgccttcaccggc
atccatacgctctatgtctcgccgctgaaggcgctggcgatcgacatcgagcgcaacctg
atgaagccggtggcggaaatgggtctgccggtcaccgtcgaaaaccgcaccggcgatacg
ccgaatgccaagcgccagcgccagaagctcagtccgccggatattctgctgacgacgccg
gagcaggtcgccctgctgctggcgaaccgcgaggccgaacgtttcttcaaggacctgaaa
tatgtggtgctcgacgagctgcactcgctcgtcacctccaaacgcggccatatgctgtcg
ctcggccttgcccgtctgcgccgccttgcccccgatctgaagacgatcggcctgtcggca
accgtcgccgagccgatggatctgcaaaaatggctggtcgcccaggaggaggggaaagag
catcatgccggcctcgtcgtcgtcgaaggcggcgccaagcccgatatctcgatcctgtcg
accgacgagcgcattccctgggccggccattccgccaaatatgccattccggatgtctat
aggcagctcctcgaccacaagacgacgctgctcttcgtcaatacccgcagccaggcggag
atgctgttccaggaactctggacgatcaacgacgacaatctgccgatcgcgctccaccac
ggctcgctcgatgtcgcgcagcgccgcaaggtcgaggcggcgatggccgaaaaccggctg
cgcgccgttgttgccacttcgacgctcgatctcggcatcgactggggcgatgtcgatctc
gtcatccatgtcggcgcgccgaagggcgcctcgcgtcttgcccagcgcatcggtcgcgcc
aatcaccgcatggacgagccctcgaaggcgatcctcgtgccggccaaccggttcgaggtg
atggagtgccaggccgccctcgacgccaattatatcggcgcccaggacacgccgcccgtc
ggccgcggcgcgctcgatgtgctcgcccagcacgtgctcggcatggcctgcgccgagcct
ttcgacatgctggaactctacgacgaagtcaccagcgcctcaccctatgccgatctcagc
tgggagaccttcgagcgcgtcgtcgatttcgtcgcgaccggcggttatgcgctgaggact
tacgagcgctacgcccgcatccgcaaaaccaaggaggggcgctggcgcgtgtcaaatcag
gccgtcgcccagcaataccgcctcaacctcggcacgatcgtcgaaagcccgatgctgaac
atccgcatggtcaagcgcggcgagggcggcaggatcggccgcggcggcgcgacgctgggg
aaggtcgaggaatatttcctcgagcaattgtcgccgggcgacaccttcatcttttcgggc
aaggtgctgcgtttcgaaggcatccgcgaaaatgaatgccttgcttctcaggccttttcg
ctcgatccgaagatcccggcttataatggtggcaagtttccgctgtcgacttatctcgcc
gagcaggtgcgggggatgatcgccgatcccgaccgctggcgccacctgccggatcaggtg
cgcgactggctgtcgctgcagaccgacaagtcgatgctgccgaagcgcgacgagttcctg
atcgaaaccttcccgcgcggcagccgcggctacatggtcgcctatcccttcgaaggccgt
ctcgcccaccagacgctcggcatgctgcttacccgccggctggagcgggccggcgccaag
ccgctcggcttcgtcgccaccgattattcgctggccgtgtggggcctcgaagatatgggg
ctgatgatcgccaatggccgcctcagcctctccgatctcttcgacgcagatatgctgggc
gacgatctcgaggcctggctcgccgaatctttccttttgaagcgtaccttccgcaattgc
gccgtgattgcaggcttgatcgagcgccgccatccgggcaaggaaaagagcggccgccag
atcaccgtctcggccgacctgatctatgacgtgctgcgcagccatgagccggaccacatc
ctgctgcaggcaacgcgccaggatgcggcgacggggcttttggatatcagccgtcttggc
gatatgctgatgcgaatcaggggccacatcacccatcgcccgctcgaccatatttccccg
ctcgccgtgccggtgatgctggagatcggacgggaggcggtgcccggcgaggcccacgat
gcgctattggccgaggcggcggacgatctgatcgccgaagctttggcatga

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