Rhodoferax sp. BAB1: HTY51_10670
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Entry
HTY51_10670 CDS
T08955
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhob
Rhodoferax sp. BAB1
Pathway
rhob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HTY51_10670 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhob03019
]
HTY51_10670 (pnp)
03016 Transfer RNA biogenesis [BR:
rhob03016
]
HTY51_10670 (pnp)
Enzymes [BR:
rhob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HTY51_10670 (pnp)
Messenger RNA biogenesis [BR:
rhob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HTY51_10670 (pnp)
Transfer RNA biogenesis [BR:
rhob03016
]
Prokaryotic type
tRNA degradation factors
HTY51_10670 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
Phage_tube
S1_2
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
QKO22319
UniProt:
A0A6N0BNZ8
LinkDB
All DBs
Position
complement(2215899..2218022)
Genome browser
AA seq
707 aa
AA seq
DB search
MTMFNKVSKTFQWGQHTVTMETGEIARQATGAVLVNIDDTVVLATVVATKSAKPGQDFFP
LTVDYTEKSYAAGKIPGSFFKREGRPSELETLTCRLIDRPIRPLFPEGFYNEVQVIVHVV
SLNPEVQADIAAMIATSAALSISGIPFNGPIGAARVGYINGEYVLNPGQTQLKDSQMDLV
VAGTESAVLMVESEAQQLSEEIMLGAVVFGHEQGNIAINAIHELVRDAGKPAWDWKAPAK
DEALIAKVNALAEEKLRAAYQIRNKQARTHACRETYAVVMADLKESGVEFDSVKVEGMLF
DIEARIVRSQILAGEPRIDGRDTRTVRPIEIRNGVLPRTHGSALFTRGETQALVVATLGT
ERDAQRIDALAGEFEDRFMLHYNMPPFATGEAGRFGTPKRREIGHGRLAKRALVACLPSK
EEFPYTMRVVSEITESNGSSSMASVCGGCLSLMDAGVPMKAHVAGIAMGLIKDGNRFAVL
TDILGDEDHLGDMDFKVAGTTNGINALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKTEVSNFAPKLFTMKINPEKIRDVIGKGGAVIRALTDETGCQINIEEDGTITIA
ATDATKAEEAKRRITEITAEVEIGKVYEGPITKILDFGALVNLLPGKDGLLHISQIAHER
VEKVTDYLSEGQIVKVKVLETDEKGRIKLSMKALLDRPAQNNGGEQA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgttcaacaaagtcagcaagaccttccagtggggccagcacacggtcaccatg
gaaaccggcgaaatcgcccgccaggccaccggtgccgtgctggtcaacatcgacgacacc
gtggtgctggccaccgtggtggccaccaagagcgccaagccgggccaggacttcttcccc
ctgacggtggactacaccgagaagtcctacgccgccggcaagatccccggcagcttcttc
aagcgtgaaggccgtcccagcgagctggagaccctgacctgccgcctgatcgaccgcccg
atccgtccgctgttccccgaaggcttctacaacgaagtccaggtgatcgtgcacgtcgtg
agcctgaaccccgaagtgcaggccgacatcgccgccatgatcgccaccagcgccgcttta
agcatcagcggcatccccttcaacggccccatcggtgccgcgcgcgtgggttacatcaat
ggcgaatacgtcctgaacccgggccagacccagctcaaggacagccagatggatctggtc
gtcgccggtaccgaatccgccgtgctgatggtggaatccgaagcgcaacagctgtcggaa
gagatcatgctgggcgccgtggtgttcggccacgagcagggcaatatcgccatcaacgcc
atccacgagctggtgcgtgacgccggcaagccggcctgggactggaaggccccggccaag
gacgaggccctgatcgccaaggtcaatgcgctggccgaagagaagctgcgcgccgcctac
cagatccgcaacaagcaggcccgcacccacgcctgccgcgagacctatgccgtcgtgatg
gccgacctgaaagagtccggcgtcgagttcgacagcgtcaaggtcgaaggcatgctgttc
gacatcgaagcgcgcatcgtgcgcagccagatcctggccggcgagccgcgcatcgacggc
cgcgacacgcgtaccgtgcgccccatcgagatccgcaacggcgtgctgccccgtacccac
ggttccgccctgttcacgcgcggcgagacccaggccctggtggttgccacgctgggcacc
gagcgcgacgcgcagcgcatcgacgcgctggccggcgagttcgaagaccgcttcatgctg
cactacaacatgcctcccttcgccaccggcgaagccggccgtttcggcaccccgaagcgc
cgcgagatcggccacggccgtctggccaagcgtgccctggtggcctgcctgccgagcaag
gaagagttcccctacaccatgcgtgtggtgtccgagatcaccgagtccaacggttcctcg
tcgatggcttccgtctgcggcggctgcctgtcgctgatggacgccggcgtgccgatgaag
gcccacgtggccggcatcgccatgggcctgatcaaggacggcaaccgtttcgccgtgctg
accgacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtacc
accaacggcatcaatgccctgcagatggacatcaagatccagggcatcaccaaagaaatc
atgcaggtcgccctggcccaggccaaggaagcccgcatgcacatcctgggcaagatgcag
gaagccatgggcgaggccaagaccgaagtttccaacttcgcgcccaagctcttcaccatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgccgtgatccgcgcg
ctgaccgacgagaccggctgccagatcaacatcgaggaagacggcaccatcaccatcgcc
gccaccgacgccaccaaggctgaggaagccaagcgtcgcatcaccgagatcaccgccgaa
gtcgaaatcggcaaggtctacgaaggcccgatcaccaagatcctggacttcggtgccctg
gtcaacctgctgcccggcaaggacggcctgctgcacatcagccagatcgcccacgagcgt
gtcgagaaggtcacggactacctgtccgaaggccagatcgtcaaggtcaaggtgctggag
accgacgagaagggtcgcatcaagctgtccatgaaggcgctgctggaccgtccggcccag
aacaacggcggcgaacaggcctga
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