Rhodococcus sp. P1Y: D8W71_05050 Help Entry D8W71_05050       CDS       T09477                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism rhop  Rhodococcus sp. P1Y Pathway rhop03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:rhop00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     D8W71_05050  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rhop03400]     D8W71_05050 Enzymes [BR:rhop01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      D8W71_05050 DNA repair and recombination proteins [BR:rhop03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      D8W71_05050 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  AYJ47816 UniProt:  A0A494SP64 LinkDB All DBs Position complement(1066347..1068620) Genome browser AA seq 757 aa AA seqDB search MATLDIGGRKVSVTNLDKVLFPEAGTTKSQVIEYYTAIASAMLPHVAGRAVTRKRWPNGV DESSFFEKNLASSAPDWLDRRDMQHSDRVVTYPLFSTVADLAWLGQQAAIEAHVPQWRFD GNTPGPATRMVFDLDPGDDVDLDRCAEVACEIRDLIAEIGFTSFPVTSGSKGIHLYVPLE KPLTTTGASTVAKRVATLLEERSPDRITATMAKAKRTGRVFVDWSQNNGKKTTVAPYSMR GRPEPTVAAPRSWEELEASGLKQLRFEEVLERFADQGDLLADLDPPLERSEPDKLSKYRS MRSASKTPEPVPAGAEPRGNDDTFVIQEHHATRLHYDFRLEHDGVLVSWAVPKNIPDDPN QNRLAVHTEDHPLEYASFEGSIPKGEYGGGEVTIWDAGTYELEKWRDDEVIVVLNGAKAQ GRFALIRTKGNQWLMHLMKEKAQKTASELPTNISPMLATAGDVNDLPDGDWAFEGKWDGF RVIARFSHGDMKLESRTGKDLTDRFHAFSALAEDLSEHEAILDGEAVVFDSDGTTSFELL QSSSGKDVRFVAFDLLHLNGTSLVKKKYSDRRRLLELLTTGLDSVLVPDVLTGTAEEALA TSVERGWEGIVAKRVDSIYQPGRRARTWIKTKNWQTQEVVIGGWRRGRGRRGGGLGSLLV GVPGPDGLRYLGRVGTGFSDRALDSLASVLGPLESSESPFAERLPTADRADAVWVTPDLV GEVRFFEWTDSMHLRHPSWRGLRDDKQPNDVVLESDP NT seq 2274 nt NT seq  +upstreamnt  +downstreamnt atggcgacgctcgacatcggcggccggaaggtttcggtcaccaacctcgacaaggttctg ttccccgaggctggcacgacaaagagccaggtcatcgagtactacacggcgattgcgtcc gcaatgcttccccacgtcgccggccgggccgtgacgcggaagcggtggcccaacggcgtc gacgagtcgtcgttcttcgagaagaacctggcctcgtcggcgccggactggctcgaccgt cgggacatgcagcattccgatcgggtggtgacgtatccgctcttttcgaccgtcgccgat ttggcctggctcggtcagcaggcagccatcgaggcacacgttccacagtggcgattcgac gggaacacccccggaccggcaacccggatggtgttcgacctcgaccctggcgacgacgtc gacctcgatcgctgcgccgaggtcgcgtgcgagatccgcgacctgatcgccgagatcggc ttcacttcattccccgtcaccagcggtagcaaaggaatccacctgtacgtccctctcgag aagccgttgacgacgacgggtgcatccaccgtcgccaagcgggttgccacccttctggag gaacggtcccctgaccgcatcaccgcaacgatggcgaaagcgaagcggacgggtcgggtg ttcgtcgactggtcgcagaacaacggtaagaagacgacggttgcgccgtactcgatgcgc ggtcgccccgaaccgaccgtcgctgctccgaggtcgtgggaggaactcgaagcctcgggc ctgaagcagctgcgcttcgaggaggtcctggagcgttttgcagatcagggcgacctgctc gcggatctggaccctccgctcgagagatcggaacccgacaagctcagcaagtaccgcagc atgcgcagcgcgtcgaaaactccggagcctgtccctgccggcgcagaacctcgcgggaac gacgacacgttcgtcatccaggaacaccacgccacgcgattgcactacgacttccgactc gaacacgacggcgtcctcgtctcgtgggcggtcccgaagaacatccccgatgaccccaac cagaaccgcctcgccgtccacaccgaggatcatccgctggagtacgcgagcttcgaaggc agcattccgaagggcgaatacggcggcggcgaggtgaccatatgggacgcgggcacttac gaactggagaagtggcgcgacgacgaggtgatagtcgtactgaacggcgccaaagctcag gggcgcttcgcgctcatcagaaccaagggcaatcagtggttgatgcacttgatgaaagag aaggcgcagaagaccgcgagtgagctccccaccaacatttcaccgatgctcgcgacggcg ggggacgtgaacgatctgcccgacggtgactgggcgttcgagggcaagtgggacgggttc cgcgtcatcgcgcgtttctcgcacggggacatgaaactggagtcgcgcacgggcaaggac ctgacggaccggttccacgcattcagcgctctcgccgaggatctctccgaacacgaggcc attctcgatggcgaagccgtggtcttcgattcggacgggaccacgagtttcgaactgctg caaagtagttcaggcaaggatgtgcgcttcgtcgcgttcgatctgctgcacctgaacggc acatcgctggtgaagaagaaatactccgatcgacgacgcctcctcgaactcctgaccacc ggcctcgactcggtgctcgtacccgacgtcctgaccggcaccgcggaagaagcactggcg acgagcgtcgagcgtggctgggaggggatcgtcgccaagcgcgtcgactcgatctaccaa cccggtcgacgagccaggacctggatcaagacgaagaactggcagacccaggaggtggtc atcggcgggtggcggcgtggccgcggacgtcgaggcggcggactcggctcactactcgtc ggcgtcccgggccccgacggtctccgctacctcgggcgggtgggaaccgggttcagtgac cgggcgctcgactccctggcgtccgtactcggaccactcgaaagcagcgaatcccccttc gccgagcggcttcccacggccgatcgggcagatgcggtgtgggtcacaccggacctcgtc ggcgaggttcgattcttcgaatggaccgactcgatgcacttgcgtcaccccagctggcgg ggccttcgtgacgacaaacaaccgaacgatgtcgtgctcgagagtgatccctag

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