Rhodococcus sp. P1Y: D8W71_14895
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Entry
D8W71_14895 CDS
T09477
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhop
Rhodococcus sp. P1Y
Pathway
rhop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D8W71_14895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhop03400
]
D8W71_14895
Enzymes [BR:
rhop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D8W71_14895
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D8W71_14895
DNA repair and recombination proteins [BR:
rhop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D8W71_14895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AYJ49395
UniProt:
A0A494T1C1
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Position
3223792..3224655
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AA seq
287 aa
AA seq
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MPELPEVEVVRLGLESHVVGATIESVDVLHPRAVRRHFAGGMDLIGQLRGRRISSAERRG
KYLWLPLEPRDVAIVVHLGMSGQMLVQPPSVPDEKHLRIRAKLDNGADLRFVDQRTFGGW
ALAPLEEVDGSIVPEPVAHIARDPLDPLFDAESVVNKLRGKHTEIKRAILDQTVLSGVGN
IYADEALWRAKIHGNRIAETLTRPALRRVLTAVHAVMGEALSQGGTSFDALYVNVNGESG
YFDRSLDAYGQEGLPCSRCGSPIRREKFMNRSSYSCPKCQPRPRSTR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaggtcgaggtcgttcggctcgggctcgaatcccacgtcgtgggg
gcgaccatcgagtcggtggacgtccttcatcccagagctgtacggcgtcacttcgccggc
ggcatggatctgatcggccagctgcgcggtcgtcgcatctcgtccgccgaacgccggggg
aagtacttatggctcccgctcgagccgcgcgacgtcgccattgtcgtccatctcggcatg
agtgggcagatgctggtgcagccgccgtcggttccggacgagaagcacctccgcatcaga
gcaaaactcgacaacggagcggacctcagattcgtcgaccaacggaccttcggagggtgg
gcgctcgctcccctggaggaagtcgacggctcgatcgttccggaaccggtcgcccatatt
gcccgagatcccctcgatccattgttcgacgcggaatccgtcgtgaacaagttgcgcgga
aagcacaccgagatcaaacgggcgattctcgatcaaacagtgttgtccggggtgggcaat
atctacgccgacgaggcattgtggcgggcgaagattcacggaaatcgcattgccgaaacg
ttgacgaggccggcgctgcgccgcgtactgactgcggtccacgcggtgatgggtgaggcc
ctctcgcaaggcggaacgtctttcgacgcgctgtacgtcaacgtcaacggcgagtcggga
tacttcgaccgatcgctcgacgcgtacgggcaggaaggccttccgtgttcccggtgcggc
agcccgatcaggcgtgagaagttcatgaaccggtcctcgtacagttgtcccaagtgccaa
ccacgaccgcggagcacacgctag
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