KEGG   Rhodocytophaga rosea: GXP67_08250
Entry
GXP67_08250       CDS       T06412                                 
Name
(GenBank) 3'-phosphoesterase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
rhoz  Rhodocytophaga rosea
Brite
KEGG Orthology (KO) [BR:rhoz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    GXP67_08250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhoz03400]
    GXP67_08250
Enzymes [BR:rhoz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GXP67_08250
DNA repair and recombination proteins [BR:rhoz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     GXP67_08250
SSDB
Motif
Pfam: LigD_N
Other DBs
NCBI-ProteinID: QHT66648
UniProt: A0A6C0GFB5
LinkDB
Position
1961191..1961898
AA seq 235 aa
MSLKNYFEKRDFTRTPEPQKGEKITGDTLHFVVQRHQASKLHYDFRLEMDGVLKSWVIPK
GPSMNPKDKRLAVMVEDHPLEYRTFEGEIPEGNYGAGIVTIWDEGTYQVAPDNEEPSDEK
TLLSQLKKGSLTFILKGKRLKGIFSLVKLQKGDPDSWLLIKKKDEEATEKAYNSEDFVKK
AAIKTTRTRKTQKKPSAGKPDPSPKVLQWEQKRQQKKQKETGMKNQKTGIAKEWK
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcttaaaaaactattttgaaaaacgtgatttcaccagaacgcccgaacctcagaaa
ggtgaaaaaattaccggcgatactttgcactttgtagttcaacgtcaccaggcttctaaa
ttgcattatgatttcaggctggagatggatggagtgctcaaaagctgggttatacccaaa
ggcccttctatgaacccgaaggataagcggctggcagtaatggtagaagatcatcccctg
gaataccgcacttttgaaggagaaattccggaaggcaactatggcgcaggcattgttacc
atatgggatgaaggaacttatcaggtagcacccgataatgaagaaccatccgatgaaaaa
actttgctctcacagctcaaaaagggaagcctgacatttatattgaaaggaaaacggctc
aagggtattttttctctggtaaaacttcagaaaggcgatccggattcctggctgctgatt
aagaaaaaggatgaagaagccaccgaaaaagcctataatagcgaagattttgtaaaaaaa
gccgccattaaaacaacccggaccagaaaaactcagaaaaaaccgtctgccggtaagccc
gatccatcccccaaggtcctgcaatgggaacagaagcggcagcaaaagaaacaaaaggaa
accggtatgaaaaatcaaaaaacaggcatagcgaaggagtggaagtag

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