Rhodobacter sp. LPB0142: LPB142_09880
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Entry
LPB142_09880 CDS
T04631
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rhp
Rhodobacter sp. LPB0142
Pathway
rhp00450
Selenocompound metabolism
rhp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LPB142_09880
Enzymes [BR:
rhp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
LPB142_09880
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
LPB142_09880
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AOZ69585
UniProt:
A0A1D9MCI7
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All DBs
Position
complement(2008980..2010200)
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AA seq
406 aa
AA seq
DB search
MYDVTQIRAEFPILAQKVNGRALVYLDNGASAQKPRAVIDAMTRFYEEDYANVHRGLHHL
STVATEAYEGVRGKIARFLNAPSEEHIVFTTGSTEGINLVSYAWAAPRLEAGDEIVLSVM
EHHANIVPWHFLRERQGVVLKWVEPEADGALDPARVLEAIGPRTKLVAVTHMSNVLGTLV
DVAAITRGAHEKGVPVLVDGSQAAVHMPVDVAAIGCDFYAITGHKLYGPSGSGALYIRPE
RMAEMRPFLGGGDMIDTVTREAVSYAKPPMRFEAGTPGIVQQVGLGVAIDYLTGLGMANI
EAHEQSLRAYAEERFRGLNWLNIQGNAPKKGAIFSMTLDGPAHAHDLSTILDKRGIAVRA
GSHCAMPLMQWLGVSATARASFGLYNTREEVDALVSGLELCHELLC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatgtgacgcagatccgcgcggagttcccgattctggcgcaaaaggtcaacggg
cgggcgctcgtctatctcgacaacggcgcctcggcgcaaaagccacgcgccgtgatcgac
gcgatgacgcgcttttacgaggaagattatgccaatgttcaccgcggcttgcatcatctc
tcgacggtggcgaccgaggcttatgagggcgtgcgcggcaagatcgcgcgctttctgaac
gcgccctctgaggagcatatcgtcttcaccaccggctcgaccgaggggatcaacctggtc
agctatgcctgggccgcgccgcgcctcgaggccggcgacgagatcgtgctgagcgtgatg
gagcatcacgccaatatcgtgccgtggcatttcctgcgcgagcggcagggggtggtgctg
aaatgggtcgagcccgaggccgatggcgcgctcgatccggcgcgggtgctcgaggcgatc
gggccgcgcacgaaactcgtcgccgtcacccatatgtcgaacgtgctcggcacgcttgtc
gatgtcgccgcgatcacccggggcgcccatgaaaagggcgtgccggtcctcgtcgatggc
tcgcaggcggccgtccacatgcccgtcgatgtcgccgcgatcggctgcgatttctacgcg
atcaccgggcataaactctatggcccctcgggctcgggcgcgctttatatccgccccgag
cggatggccgagatgcgccccttcctcggcggcggcgacatgatcgacacggtgacgcgc
gaggcggtcagctatgccaagccgccgatgcgcttcgaggcgggcacgcccggcatcgtc
cagcaagtgggcctcggcgttgcgatcgattacctcaccgggctcggcatggccaatatc
gaggcccatgaacaaagcctgcgcgcctatgccgaagagcggttccgcggcctcaactgg
ttgaatatccagggaaatgctccgaaaaagggggcgattttctcgatgaccctcgacggg
ccggcgcatgcccatgatctctcgacgatcctcgacaaacgcggcatcgcggtgcgcgcg
ggcagccattgcgcgatgcccttgatgcaatggctcggcgtctcggccaccgcgcgcgcc
tccttcgggctctataacacccgcgaggaggtcgatgcgctggtcagcgggctcgagctc
tgccacgagttgctctgctga
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