Rhodococcus sp. p52: IM25_07935
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Entry
IM25_07935 CDS
T05434
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq03030
DNA replication
rhq03430
Mismatch repair
rhq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM25_07935
03430 Mismatch repair
IM25_07935
03440 Homologous recombination
IM25_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhq03032
]
IM25_07935
03400 DNA repair and recombination proteins [BR:
rhq03400
]
IM25_07935
Enzymes [BR:
rhq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM25_07935
DNA replication proteins [BR:
rhq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM25_07935
DNA repair and recombination proteins [BR:
rhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM25_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_30
AAA_19
DnaX_C
Rad17
AAA_14
AAA_16
Mg_chelatase
DEAD
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AOD24253
UniProt:
A0A1B2UJD6
LinkDB
All DBs
Position
1719826..1722060
Genome browser
AA seq
744 aa
AA seq
DB search
MALYRKYRPATFAEVVGQEHVTVPLSTALDTGRINHAYLFSGPRGCGKTSSARILARSLN
CETGPTSTPCGTCRSCVSLGPGGGGNLDVTELDAASHGGVDDTRELRDRAFYAPAESRYR
IFIIDEAHMVTTQGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPT
AMRGLLEQICGQENVPVEDAVYPLVIRAGGGPPRDSLSVMDQLLAGAGPEGVTYERALSL
LGVTDVALIDEAVDSLAAGDGAALFGTVEKVMDAGHDPRRFAVDLLERLRDLILMKSVPD
AAERGLVDAPGDVLERMRDEATRLGPATLTRYAEIVHAGLGEMRGATSPRLLLEVMCARM
LLPAASDAETAVLQRLERLEQGIVAAPAGGVAPKPVAVPAAPAAPPISPDEPAARFQRPS
QRRAAEAAPAAPSNETAQPRETAQPQPEAAQQPPAQQAPVQPEPAQPAPAPTPPPAAAQP
PVVPEAPQPQSVPDEVAAQEVPPPAPEEPVAPEPEPARAAGGPDAAQMRGVWSEVRAKVR
ERSRTVEVMLSGATVRSVDGTRVVLVHDSAPLAKRLADARNATVIADALKAVFGGEFEVT
CVHGSAAAEAPARTPAPEKNSRPAGQPRFSRPSQAKNAAPPAPAEAPAAPQRPAAAPSAA
PTFTRPSVESVDDIPPPEAPDLPDDPGPGYDAPPPDPSQMTEADVEEMFAEAATPGDPST
RRDPEEVAIELLKDVLGAKPLDEK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtggctctgtaccggaagtatcgacctgcgaccttcgcggaggtggtggggcaggagcac
gtcaccgtgcccctcagcacggcgctcgacacgggccgcatcaaccacgcctacctgttc
tcgggtcctcgtggatgcggcaagacgtcctcggcgcgcatcctcgcccgctcgctcaac
tgcgagaccggccccacgtccactccgtgcggaacgtgccggtcgtgcgtgtcgctcggc
ccgggcggtggaggcaacctcgacgtcaccgaactcgacgccgcgagccacggcggtgtc
gacgacacccgcgaactccgcgaccgcgcgttctacgctccagccgaatcgcgctaccgc
atcttcatcatcgacgaggcgcacatggtcaccacgcagggcttcaacgccctgctcaag
atcgtggaggagccgccggagcacctcatcttcgtcttcgcgaccaccgagcccgagaag
gtgctgcccaccatccggtcgcgcacgcaccactatcccttccggctcctcgctcccacg
gcgatgcggggtctgctcgagcagatctgcggccaggagaacgtgccggtcgaggacgcg
gtctatccgctggtcatccgtgccggcggtggacccccccgcgactcgctgtcggtgatg
gaccagctcctcgccggtgccggccccgagggcgtcacctacgagcgcgccctgtcgctg
ctcggcgtcaccgacgtcgctctcatcgacgaggccgtcgattcgctcgcggccggcgac
ggcgcggcgctgttcggcaccgtcgagaaggtcatggacgccgggcacgacccgcgtcgc
ttcgccgtcgaccttctcgaacggctccgcgatctcatcctcatgaagtccgtccccgac
gccgccgagcgcggactcgtcgacgcacccggcgacgtcctcgagcggatgcgcgacgaa
gcgacccgcctgggcccggccaccctcacccgctacgccgagatcgtgcacgccgggctc
ggcgagatgcgcggtgcgacgtcgccgcgtctgctgctcgaggtgatgtgcgcgcgcatg
ctgctccccgcggcgtccgacgcggaaaccgctgtcctgcaacgcctcgaacgactcgag
cagggcatcgtcgcagccccggcgggaggggtcgcgccgaagccggtggcagtccccgcc
gcgcctgccgcaccgcccatctcgcccgacgaacccgcggcacgtttccagcgtccctcc
cagcgccgggcagcggaggcggcgcctgccgcaccgtccaacgagactgctcagccccgc
gagactgctcagccgcagccggaagctgcccagcaaccccctgcccagcaggcaccggtg
cagcccgaaccggcccagccggcacctgccccgacaccgcctcccgccgccgcgcaacct
cccgtcgtcccggaggctccacagccgcagagtgtgcccgacgaggttgccgcgcaggag
gttccgccgcccgcccccgaggagccggttgctcccgagcccgaacccgcccgcgcggca
ggcggtcccgacgcagcccagatgcggggcgtgtggtcggaggtgcgcgcgaaggtccgc
gaacgcagccgcaccgtcgaggtgatgctctcgggcgccaccgtccgatcggtcgacggc
acccgcgtcgtgctcgtgcacgactccgctccgctcgcgaagcgactcgccgacgcgcgc
aacgccacggtcatcgccgatgcgctgaaggcggtcttcggtggagagttcgaggtcacc
tgcgtccacggatccgctgctgcggaggcgcctgccagaaccccggcgcccgaaaagaat
tcgcgcccggcgggtcaaccgcgtttctcccggccgagccaggcgaagaatgccgcgccg
cccgcacccgccgaagcccccgccgcgccgcagcgaccggcggccgcaccgtcggctgcc
ccgacgttcacgcgtccgtccgtggagagcgtcgacgacatcccgccgcccgaagccccc
gaccttcccgacgatccgggcccgggctacgacgcaccgccgcccgacccgtcgcagatg
acggaggcggacgtcgaggagatgttcgccgaggccgccacgcccggcgacccgtcgacg
cgccgcgatcctgaagaagtcgcgatcgaactgctcaaggacgtgctgggagcgaaaccg
ctcgacgagaagtag
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