Rhodococcus sp. p52: IM25_10720 Help Entry IM25_10720        CDS       T05434                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism rhq  Rhodococcus sp. p52 Pathway rhq03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:rhq00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     IM25_10720  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rhq03400]     IM25_10720 Enzymes [BR:rhq01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      IM25_10720 DNA repair and recombination proteins [BR:rhq03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      IM25_10720 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S Big_4 Motif Other DBs NCBI-ProteinID:  AOD22023 UniProt:  A0A1B2UCZ2 LinkDB All DBs Position 2294959..2297337 Genome browser AA seq 792 aa AA seqDB search MPTRTIDGHRITLTNLDKVLYPRTGTTKGEVVEYYEAVAEAMLPHIVGRAATRNRWPNGV GEQSFFEKNLPDHAPAWLDRRTLHHKDRRVTYPLFDSAAGLVWLGQQAALELHVHQWRFD GEKAGPATRIVFDLDPGPGVGLAECAEVARHVRDTVAELGWSAYPVTSGSKGIHLYVPLD RMLSSSGASKVAKQVARNLETTLPDLVTATMAKSAREGKVFVDWSQNNSSKTTVAPYSLR GRDEPWVAAPRSWDELDDPDLAQLQFREVLARIEEFGDLLAGLDPPLGKAGSGDSGDKAG SGGKAGSGDALDTYRGKRDASRTPEPVPDRVPEDGPGNRFVIQEHHARRLHYDLRLERDG VLASWAVPKNLPDTSGRNNLAVRTEDHPIEYLTFHGTIPKDEYGAGSMTVWDTGTYETEK WRDDEGIVRFHGDRIEGRYALIRTEKNQWLAHRMKDQSSPSTESSDADPASLVGSSGSKA FPRDLAPMLATSGDVSGLDAEDWAFEGKWDGYRAIAEIEDGTVRLRSRSGRDVTGDYRKL VELATILDGHRAVLDGEIVAVDRSGVTSFSMLQRGVNYEYRVFDVLYLDGVSLLRKTYDD RRRVLEALAAATDGLIVPDLLSGDGSKALARSRAKNWEGVVAKRRDSVYLPGKRGAGWIK SKNWLTQTVVLGGYRRGNGNRASTFGSLLLGVYDDDGEFVYVGKVGTGFDDETLLSVTKA VKGRTSRTNPFANEVPAAERRDAVWLRPELVGEVRFGGWTEGDRVRHASWRGLRDDVDAS SVVREEETGADC NT seq 2379 nt NT seq  +upstreamnt  +downstreamnt atgccgacccggacgatcgacggtcaccgcatcaccctgacgaacctcgacaaggtgctg tatccgcgcaccgggacgacgaagggcgaggtcgtcgagtattacgaagccgtcgccgag gcgatgcttccccatatcgtcggccgggccgcgacccgcaaccggtggccgaacggtgtc ggcgaacagtccttcttcgagaagaacctccccgaccacgcaccggcctggctcgaccgt cgcaccctgcatcacaaggaccggcgggtcacctacccgctgttcgattccgccgccggg ctcgtctggctcgggcaacaggcagccctcgaactccacgtgcaccagtggcgtttcgac ggagagaaggccggacccgcgacccgcatcgtcttcgacctcgacccggggcccggcgtg ggcctggccgagtgtgcggaggtcgcgcgccatgtgcgcgacaccgtcgccgaactcggg tggtcggcctatccggtcaccagcggcagcaagggcatccacctgtacgtcccgctcgat cggatgctgtcgtcgtcgggggcgtcgaaggtcgcgaagcaggtcgcgcgcaatctcgag accacccttcccgacctggtgaccgcgacgatggcgaaatcggcgcgcgagggcaaggtc ttcgtcgactggagccagaacaacagttccaagacgacggtcgcgccgtactcgctgcgc ggtcgcgacgagccgtgggtagcggcgccgcgcagctgggacgaactcgacgaccccgac ctcgcgcaactgcagttccgggaggtcctcgcccgcatcgaggagttcggggacctgctc gccggtctcgacccgcccctcggcaaggccgggtccggagattccggagataaggccggg tccggcggtaaggccgggtctggagacgccctggacacctaccgcggcaagcgcgacgcg tcgcgcaccccggaaccggtacccgaccgcgtccccgaggacggccccggcaacaggttc gtcatccaggagcaccacgcgcgtcgcctgcactacgacctgcgcctcgaacgcgacggt gtgctggcctcgtgggccgtaccgaagaacctgccggacacctcggggcgcaacaatctc gcggtacggaccgaggaccacccgatcgagtacctgaccttccacgggacgatcccgaag gacgaatacggcgccggcagcatgaccgtgtgggacaccggcacctacgagaccgagaag tggcgggacgacgaggggatcgtgcggttccacggcgaccggatcgagggacggtacgcg ctgatccgcaccgagaagaaccagtggctggcgcaccgcatgaaggaccagtcgtcgccg agcaccgagtcgtccgatgccgatccggcctccctcgtcggatcgtcggggtccaaggcc ttcccgcgcgatctcgcgcccatgctcgcgacctccggtgacgtctcgggtctcgacgcc gaagactgggcgttcgaaggcaaatgggacggataccgcgccatcgcggagatcgaggac ggcaccgtcaggctccgcagccgatccggtcgcgatgtcaccggcgactaccggaagctc gtcgaactcgcgacgatcctcgacggtcaccgggcggtgctcgacggggagatcgtcgcc gtggaccgctccggggtgacgagcttctcgatgctgcagcggggcgtgaactacgagtac cgcgtgttcgacgtgctgtatctcgacggggtgtcgctgctgcgcaagacctacgacgat cgccgacgggtcctcgaggcgctcgccgctgccacggacggactgatcgtcccggatctg ctctcgggtgacggctcgaaggctctcgcgcgcagccgcgcgaagaactgggagggcgtg gtcgccaaacgccgggactccgtgtatctgccgggcaagcgcggcgccggatggatcaaa tcgaagaactggctcacccagaccgtcgtgctcggcggataccgccgtggcaacggcaac cgtgcctcgaccttcggctccctgctgctcggcgtctacgacgacgacggtgagttcgtg tacgtcggcaaggtcggcaccggtttcgacgacgagacgctcctgtcggtgacgaaggct gtgaaagggcgcacgagccgcacgaacccgttcgcgaacgaagtgccggccgccgaacgc cgcgatgcggtgtggttgcggcccgaactcgtgggggaggtgcggttcggaggatggacg gaaggagaccgggtgcggcacgcgagctggcgtggtctgcgcgacgatgtggacgcgtcg agtgtggtgcgagaagaggaaacaggcgctgactgctaa

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