Rhodococcus sp. p52: IM25_20845
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Entry
IM25_20845 CDS
T05434
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
rhq
Rhodococcus sp. p52
Pathway
rhq00250
Alanine, aspartate and glutamate metabolism
rhq00410
beta-Alanine metabolism
rhq00430
Taurine and hypotaurine metabolism
rhq00650
Butanoate metabolism
rhq01100
Metabolic pathways
rhq01110
Biosynthesis of secondary metabolites
rhq01120
Microbial metabolism in diverse environments
rhq02024
Quorum sensing
Module
rhq_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rhq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
IM25_20845
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
IM25_20845
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IM25_20845
00430 Taurine and hypotaurine metabolism
IM25_20845
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IM25_20845
Enzymes [BR:
rhq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
IM25_20845
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AOD24560
UniProt:
A0A1B2UKA4
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Position
complement(4510244..4511623)
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AA seq
459 aa
AA seq
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MSESNAPAETLAPAFTGRLGTDPIPALRLPKSETDPEATYQFIHDELMLDGSSRLNLATF
VTTWMDPQAGRLMAETFDKNMIDKDEYPATAEIETRCVNMVAALFHAENLDPADPSSATG
VSTIGSSEAVMLGGLALKWRWREARRAAGKDASKPNLVLGSNVQVVWEKFCRYFDVEPKS
LPMEPGRYVITPEQVREAVDENTIGVVAILGTTFTGELEPVAEIAAALDELAASGGPDVP
LHVDAASGGFVVPFLHPDLEWDFRVPRVVSINVSGHKYGMTYPGIGFVVWRSKEHLPEDL
VFRVNYLGGDMPTFTLNFSRPGNQVIGQYYNFIRLGVAGYTQIMETLRDTALMLSKQISE
IENMAIITDGSAIPVISFEVTGDPGFTVFDISHELRARGFQVPAYTMPADAEDVAVLRIV
LREGFSRDIAHKLGEDIADVVGYLREGVGRGHTDQAFAH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccaatgctccagccgagacactcgcacctgccttcaccggcagactcggt
accgacccgattcctgctctgcgacttcccaagtcggagaccgatccggaggcgacgtac
cagttcatacacgacgagttgatgctcgacggcagctcgcggctcaacctggcgaccttc
gtcaccacgtggatggatccgcaggcgggtcgtctcatggccgagacgttcgacaagaac
atgatcgacaaggacgagtatccggccacggcggagatcgagacccgctgcgtcaacatg
gtcgcggccctgttccacgccgagaacctcgatccggccgatccgtcgtcggccaccggc
gtctcgacgatcggttcgtccgaggccgtcatgctcggcggtctcgcgctcaagtggcgc
tggcgtgaggcccgtagggccgccggcaaggacgcgtcgaagccgaacctggtgctcggc
agcaacgtgcaggtggtgtgggagaagttctgccgctacttcgacgtcgagccgaagtcc
ctgccgatggagcccggccgttacgtcatcacccccgagcaggtccgtgaagcggtcgac
gagaacaccatcggcgtcgtcgcgatcctcggcaccaccttcaccggtgaactcgagccg
gtggcggagatcgccgccgcgctcgacgagctcgcggcctccggcggtcccgacgtcccg
ttgcacgtcgacgccgcctccggtggcttcgtggtgcccttcctccatccggacctcgaa
tgggacttccgtgtgccgcgggtcgtgtccatcaacgtcagtggtcacaagtacggcatg
acctatccgggtatcggtttcgtcgtctggcgctcgaaggaacatctgcccgaggacctg
gtcttccgggtcaactacctcggtggcgacatgccgacgttcacgctcaacttctcgcgt
cctggtaaccaggtcatcggccagtactacaacttcattcggctcggtgtcgccgggtac
acgcagatcatggagaccctgcgcgacaccgcgctcatgctgtcgaagcagatctccgag
atcgagaacatggcgatcatcacggacggctccgccatcccggtcatctccttcgaggtg
acgggcgaccccggcttcacggtgttcgacatctcccacgaattgcgggcccgcggattc
caggttccggcctacacgatgccggccgacgcggaggacgtcgcggtcctgcgaatcgtg
cttcgcgagggcttcagccgggacatcgcccacaagctcggtgaagacatcgccgatgta
gtcggatatctccgcgagggtgtcggtcgcggccacaccgaccaggcattcgcacactga
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