Rhizobium sp. 11515TR: CKA34_01770
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Entry
CKA34_01770 CDS
T06097
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKA34_01770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Big_9
TIG
Cadherin_5
Cadherin-like
TIG_SUH
GspA_SrpA_N
DUF2686
Motif
Other DBs
NCBI-ProteinID:
ASW04754
UniProt:
A0A248W0H0
LinkDB
All DBs
Position
complement(366894..372413)
Genome browser
AA seq
1839 aa
AA seq
DB search
MMSNSGLGRAPACQRQAGQPFLTFILTALLVLFVSTAQAFAMSAACADINQNWANRTTAR
VDQYSIGTANGLQAGEVVNFSMTPDPGQGVNFMPGDATGWGYYAPPYYTAISDTFVVADH
MSSGNYLQLELATADWTYSGPANGTVNVTCSASGGTTVTLSPADGAAMTAGILGTTYSNS
SISAAGGSGSISFSASGLPSGLTMNSSTGIISGVPTVAGAFNVVVTATAAVSGSASATYT
LKINNPPIANAVARSVAANSSANPIALSISGGAADSVAVATQAAHGTASVSGMTVTYTPI
AGYSGVDSFTYTATNADGTSDPATVTITVTPPTLVLQPSAGALVNGTLATTYSQTLTASG
GTAPYGYSIGSGSLPAGLSLNSSTGLLSGTPTVAGNSSFTVTATDAYGATGSAAYTLAIA
APVSSDATLSNIWIGAGTLSPDFSSQTTAYSVSLPATATSVWMNASTTSSAATFLAGGVV
RTTGQSWQVQLAPGENIVTVIGQAEDGTTTRTYTVTITVSVPAPTVTSINPTSGPQSGGT
VVTLTGSNFSNVTAVTFGATPAASFTVNSPSSITAISPAGSVGTVDIRVTTAGGTSAASA
SDLFTYLGAPMVTSISPASGPQGGGTVVTLTGSNFTNATAISFGGTPAAAFAVNNASSIT
ATTPAHSAGATNVTVITAGGSGTLTGGYTFLNPPVAQAVSVTVGQNSSANVITLEISGGT
ASSVAVSTAPAHGTATATGTSITYTPAAGYTGLDSFAYTASNADGTSAPAIVSVAISAPT
ITISPASDGLPGGVAGTAYSQTITASGGTGPYSFSQTGTLPTGLVLSSAGNLSGTPTAAG
SFNFTIVATDSSTGAGAPFTAARAYSITIGSPTITITPATLPGGTAGIAYSQTLTASGGT
GSYAFSLTSGSLPPGVALSSAGALVGTPTTAGPFNFTITATDGNHFTGSQAYTVTIGAPT
ITITPATLPPAGIGAAYSQTFSASGGIGSYSYTLTAGALPAGLTLSSAGILSGTPTAGGT
FNITITATDSATFIGSRSYSLVVGSSTIAIAPTTLPAATVAAAYNQTITASGGTSPYSYA
ITAGTLPAGLTLSSGGVLSGTPTASGTFNVTITATDGSTGAGPFTGSRAYSLAVNVQPPI
AGNVAATVAANSSANPITLAITGGAPTSVTVATGANHGTATASGTSITYTPTPGYSGSDS
FTYTATNASGTSASATVSMTITAPNLTFSPSGGALPAGVVSTAYNQTVTASGGTSPYGYS
VSGTLPAGLSLNHATGAITGTPTTAGSYSFSISATDANNATSSAAYTIAVAPPAATFAFS
PSGGALPPAMAGEGYSQQITATGGAGTKIYSLASGTLPNGLVLNISTGQLTGPLATGTQG
DYSFAIQVRDSNGSTGTVAFTLKVIQRTISVADQVVNVPEGSTPPDVYLNRGATGGPFTS
ADLAFVTPPNAGTVTIIQGQLAQAGSATAPVGWYLHYTPDPAYSGQVRVGFKLVSALGTS
NVGTITYNVRYDAAKVAEDIDGLVRGFVQSRQNMIANTIEVPGLLQRRQMEKANDPITVR
MSPSEQGMTLGFSTSLAQMRAGGSDDDAGSAPFNVWIGGAFLMHDDKSKKDSTSKWGSFG
MVNMGVDYLLSEKALVGVSFHYDRMTDPTDQDAKLTGNGWLAGPYASLELGKGVFWNGSL
RYGGSSNTINTQFWDGGFKTTRWMADTSIEGQWDLDEATTISPKLRAVYFSEKVDDYTVK
NSSGGAITIDGFNEDQFRVSLGAEIARSFTMENGAKLKPKLALTGGFSGLDGSGAFGAVT
AGMSLQTASFWMLDTSLLFNIEGDGQKSVGAKVAASKKF
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgaattccggtttggggcgtgcgccagcctgccaaaggcaggctgggcaaccc
tttctcacgttcattctgactgcactgctggtcctttttgtcagcaccgctcaggcgttt
gccatgtccgctgcttgcgcggatataaatcagaactgggctaaccggaccacggcgcgg
gtagatcaatattccattggcacagcgaatgggcttcaggccggggaggtggtcaatttc
agtatgactccagatcccggccaaggcgtgaatttcatgccaggcgacgcgacaggatgg
ggctactatgctccgccttactacaccgcgatcagcgatacgtttgtcgttgccgatcat
atgtcgtccggcaactatctccagcttgaactcgccaccgcggactggacatattccggt
ccggcaaacggcacagtcaacgtgacctgtagcgcttcgggcggtacgacggtcacgctc
tcgcctgccgatggtgcggcgatgactgcgggtatcctcggaaccacctatagcaacagc
tcgatctcggccgcgggtggatcaggttcgatcagcttctcggcctcgggcttgcccagt
ggccttacgatgaattcctcaacgggtatcatcagtggcgtccccaccgtggccggcgcg
tttaatgtcgtcgtcaccgcgaccgccgcagtctcaggctccgcttcggcaacctatacg
ctaaagattaataatccgccgatcgccaatgcggtagcgcggagcgttgcggcaaactcg
tccgccaatcctatcgcgctgagtatctccggaggagctgccgacagcgtggctgtcgcg
acccaagcagctcacggaaccgccagtgtttccggaatgacggtcacctatacaccgatc
gctggctattccggtgtcgacagcttcacctacaccgccacgaacgcggacggtacttca
gatccggcgaccgtgacaattaccgtcacgcctccaacgcttgtccttcagccgtccgca
ggcgcgctggtgaacggtacattggcaaccacctacagccaaaccttgacagcttcgggt
ggcaccgccccttacggctactccattggctccggctcgcttccagcgggacttagcctc
aattcctcgactggtttgctttccggcacaccaaccgttgcaggcaattcaagctttacg
gttactgccacggatgcatatggcgcgacagggtcggccgcgtacacgcttgcgatcgct
gctcccgtgtcctcggatgcgactttgtcgaacatctggattggagcggggactttgtcg
cccgatttcagttcgcaaaccacagcatattcggtgtcgttgccggctacggccacgagt
gtctggatgaatgccagcacgacgtcttcggccgcaactttccttgcgggcggtgtcgtg
cgcacgacgggccagtcgtggcaggtccagcttgctcccggtgaaaatatcgtaaccgtc
attggccaagcagaggacggcactacaaccagaacttacacggtgacgatcacggtttcc
gtgcctgcgccgacggtgacctctatcaatccgacctccggaccgcaaagcggcggtacc
gttgttacgttgacgggctcgaacttcagcaacgtgaccgcagtcacattcggcgcaacg
cctgcggcaagtttcacggtcaattcgccaagctcgatcaccgctatatcgcccgctggc
agtgtcggaactgtagatatccgagtgacaacggcaggggggacgagcgcagcctccgcc
tccgatctgttcacctaccttggggctccaatggtgacttcgatcagtccggcatccgga
ccgcaaggcggcggcacggtcgtaacactgacgggctcgaacttcaccaatgcgacggcc
atttccttcggtggaacgccagcggcagccttcgcagttaacaacgcatcgtcgatcact
gcgaccacccctgcccacagtgccggcgcaaccaatgtcaccgtcatcaccgctggcggt
tccggcactttgaccggaggctacacattcctcaacccgccggtcgcccaggccgtatcg
gtgaccgtcgggcagaactcgtcagcaaacgtgatcaccttggagatttcaggcggaacc
gcaagctcggttgccgtgtcgacggcgccggcccatggaaccgcgaccgcgaccggcact
tcaataacctatacgcctgcggctggttacaccggcctggacagtttcgcttacaccgcg
agcaatgcggatggaacatcggcgccagcgattgttagcgttgcgatttctgccccaaca
atcacgatcagccctgcttcggacgggctgccgggcggcgtcgcgggaacggcctatagc
cagacgatcacggcttcgggcggaacgggtccctatagcttttcgcagacgggtacactc
ccgacggggcttgtgctgtcttcggccggaaatctctccggcacgccgaccgcagcgggt
agctttaacttcaccattgttgcgactgacagctcgacgggcgcgggtgcccccttcacc
gccgctagagcctatagcatcacaatcggctccccgacgatcacgatcacaccggcaaca
ctgccggggggcacggccggaatcgcctatagtcagacattgacagcctcgggcggaacc
ggctcctatgcctttagcctcacaagcgggagccttccgccaggcgtagcgctttcgtcg
gccggtgcgctcgtcggtacgccgaccaccgcaggacctttcaacttcaccatcaccgcg
acggacggcaaccactttaccggttcgcaggcttataccgttacgatcggcgccccgacg
atcacgatcacaccggcaaccctgccgccggccgggatcggggccgcctatagtcagacc
ttcagtgcctctggcggcatcggctcctacagctacacgctcacggcaggcgccttgcca
gccggtctcactctgtcgtcagccggcatactttcgggcacgccgacagctggcggcacc
ttcaatatcacgatcacggcgacggacagcgctacgtttatcggctccaggtcctacagc
ttggttgtcggctcctcaacgattgcaatcgcgccgaccacgttgccggctgcaaccgtt
gctgccgcctataaccagaccatcacggcttcaggcggcaccagtccttatagctatgcg
ataacggctggcactctgcccgccggcctgacgctgtcgtccggcggtgttctctccggc
acgccgacggcatcgggcactttcaacgtgacgatcaccgcaacggacggttcgaccgga
gccggtccctttacgggctccagagcctacagtctggcggtcaacgtccagccaccgatc
gccggcaacgtcgcggcgaccgttgccgccaattcatcggccaatccgatcacactcgcc
atcacaggcggcgcgccgacctcggtcacggtagcaaccggggccaaccatgggacagca
actgcctcgggaacgtccatcacctatacgccgacaccaggctatagcggatcggacagc
ttcacctacaccgcaaccaacgcctccggcacctctgcatcggcaaccgtgagcatgacg
atcacggcgccaaatctgacattctcgccgtcgggcggtgccttaccggccggtgtcgtc
agcactgcctataatcaaacggtgacggcttcaggcggcaccagtccctatggctacagc
gtcagcggcacgctgcccgcgggcctgtcgctcaaccacgccacgggcgctattaccggc
acgccgacgacggccggaagctacagcttctccatcagcgccactgacgccaacaatgcc
acaagctcggccgcctatacgatcgcggttgcaccgccagcggctaccttcgccttctcg
ccgtccggcggtgcgctgccgccggccatggccggcgagggctacagccagcagatcacc
gcaaccggcggcgcgggcacgaagatctatagccttgcctccggcacgctgccgaacggg
ttggtgctcaatatctctaccggtcagctcactggcccgctcgcaaccggcacacaaggg
gactacagcttcgctattcaggtcagggatagcaatggttccaccgggacggtggcattc
acgctcaaggtcatccagcgcaccatcagtgtggcggatcaagtcgtcaatgtgccggaa
ggttcgacaccgccggatgtctatctgaaccgtggcgccacaggtgggccgttcacatcc
gcggatctggcgtttgtcacgccgccgaatgcgggcacggtgacgatcatccagggtcag
ctggcgcaggcgggctcggcgaccgccccggtcggttggtacctgcactatacgccagac
ccggcctattccggccaggtccgcgtcggcttcaagctcgtcagcgcgcttggaacctcc
aatgtcggcaccatcacctacaatgtccgctatgacgcggcaaaggtcgccgaggacatc
gacggcctcgtccgtggcttcgtccaatccaggcagaacatgatcgccaacactatcgag
gtgcccggccttctgcagcgccggcagatggagaaggcgaacgatccgatcaccgtgcgt
atgtcaccctccgaacagggcatgacgcttggcttctccaccagcctggcgcagatgcgg
gccggcggtagcgacgacgatgccggctctgcgccgttcaacgtctggatcgggggcgcg
ttcctgatgcatgacgacaagagcaagaaggatagcaccagcaagtggggcagcttcggc
atggtcaacatgggcgtcgactatctgctgtcggaaaaggccctggtcggcgtatccttc
cattacgaccgtatgaccgatccgaccgatcaggatgccaagctgaccggcaatggctgg
ctggccggtccctatgcttcgctggagctgggcaagggtgtgttctggaacggcagcctg
cgctatggcggatcgagcaacaccatcaacacccagttctgggacggcggcttcaagacg
acacgctggatggccgacacttcgatcgaggggcaatgggacctcgacgaggccacgacg
atctcgccgaagctcagggccgtctacttctccgaaaaggtcgacgactacacagtcaag
aacagttcaggcggtgccattaccattgacggattcaacgaggaccagttccgcgtcagc
ctgggcgccgagatcgcccgctcgttcaccatggagaacggcgctaagctcaagccgaag
ctcgcactgaccggtggcttttccggtcttgacggttcgggtgcattcggagctgtgaca
gccggcatgagcctccaaaccgcaagcttctggatgcttgacacaagcctactcttcaac
atcgaaggtgatggacagaaatcggtcggtgcaaaagtcgcggcctccaagaagttttga
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