Rhizobium sp. 11515TR: CKA34_06235
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Entry
CKA34_06235 CDS
T06097
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr02024
Quorum sensing
rhr03060
Protein export
rhr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CKA34_06235
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CKA34_06235
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKA34_06235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhr02044
]
CKA34_06235
Secretion system [BR:
rhr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CKA34_06235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF
SecD_1st
Sec_GG
ACR_tran
MMPL
SecD-TM1
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ASW05519
UniProt:
A0A248W2E9
LinkDB
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Position
complement(1274458..1277013)
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AA seq
851 aa
AA seq
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MRTSPWLVALYTVIIVIGFLIALPNALPPSVLSKIPSWLPHSQVSLGLDLRGGSYLVLEV
DEKDLTNGRLQSLQQDARRVLRDKNIQTRSVVRNGDQIVVTLSDASQSSDAVTQLQTLAN
TITSGLSAGQSDLNIKPNGATIAMSFSPAGISANVDSAVQQSLEVIRKRVDQVGVAEPTI
QRVGPNRVLVQLPGAQDPSHLRELLGSTAKMSFHLLADNVDPNNPGPGVTIMKDEQGNSY
PVLDRIELSGDRLTDARVSFDPNTHEPLVTFRFDSAGANRFAEITRENVGKPFAIVLDNK
VLSAPNIREPITGGSGQISGNFTADSATTLAALLRAGALPAKLTVIEERTVGADLGSDAI
QKGIYSGLVGFVLVAAFIFVLYGAWGILANVALLIHTVLTFSALTLVGATLTLPGIAGVV
LGIGLAVDANVLINERIREETRKGRGAFAAIDNGFKKAYSTIIDGNMTALIAAAILFYFG
SGPVRGFAVTMGLGLIISMFTSVAFVRVVMIAITRRRKLKVINIRPLIPFSPYDKHIQFM
KARFFGVTVSAILSLASVVLFIHPGLNYGVDFRGGIQMSVKTKDAADLATFREGLNTLGL
GEIALQSFGDNNSLLVRAQRQDGGEEAQTAAVTKLKAEIVKIDPSATIEGTDVIGPKVSG
ELAWAGILSVVIASLAMLFYIWYRFEWPFAVGAIVTLVLDVTKAIGFFAITGLDFNLTAI
AAILTLVGYSVNDKVVVYDRMRENMRLYKSMPLRDIIDKSINETLARSLYTNATAFLALV
PMAIWGGSAVSSFAIPMVFGILVAGASSVFIAAPILLFLGDWRRRHAKPVANDTASTDGK
SGKDNKQIPAA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacctcaccatggctcgtggcactctatacggtgatcatcgtcattggctttctg
atcgcactgccgaacgcgctgccgccgtcggttctcagcaagatcccatcctggctgccg
catagccaggtttcgctcggcctcgacctccgcggcggctcctatctcgttctcgaagtc
gacgagaaggacctgacgaacggccggctgcaatcgctgcagcaggacgcgcgccgcgtg
ctacgcgacaagaacatccagacccgctcggtcgtccgcaacggcgaccagatcgtcgtg
acgctcagcgatgcctcacagagcagcgatgccgtgacacaactgcagacgctggccaat
acgatcacgtcgggcctctcggccggccagtccgatctcaacatcaaaccgaatggcgcg
acgatcgcgatgtccttctcgccggccggcatttcggccaacgtcgattccgccgttcag
cagagccttgaagtcatccgcaagcgcgtcgaccaggtgggcgttgccgagccgaccatt
cagcgcgtcgggccgaaccgcgttctcgtccagcttccgggcgcacaggatccgtcgcac
ctgcgcgagcttctcggctcgaccgcgaagatgtccttccatctgctggccgataacgtc
gatccgaacaatcccggccctggcgtcaccatcatgaaggacgagcagggcaacagctat
ccggttctcgaccgcatcgaattgtccggcgaccgcctgacggatgcccgcgtcagcttc
gatccgaacacgcatgagccgctcgtcaccttccgcttcgacagcgccggtgccaaccgc
tttgcggaaatcacccgcgaaaatgtcggcaagccctttgctatcgtcctcgacaacaag
gttctgagcgcgccgaacatccgcgaaccgatcaccggcggttcgggccagatctccggc
aacttcaccgcagacagtgccaccacgcttgcagccttgctgcgcgccggtgccctgccg
gccaagctcaccgttatcgaagagcgtaccgtcggcgccgaccttggtagcgacgcgatc
cagaagggcatctatagcggcttagtcggcttcgtcctggttgccgccttcatcttcgtg
ctctatggcgcctgggggattctggcgaatgtcgccctgctcatccacacggtcctgacc
ttctcggccctgacgcttgtcggcgccacgctgacgctgcccggcatcgccggcgtcgtc
cttggtatcggtctcgcggttgatgccaacgttctcatcaacgagcgcatccgcgaagaa
acccgcaagggccgcggcgccttcgccgccatcgataacggcttcaagaaggcttattcg
acgatcatcgacggcaacatgacggcgctgatcgccgccgccatcctgttctacttcggc
tccggcccggttcgcggctttgccgtgaccatgggtctcggcctcatcatctcaatgttc
acctccgtcgccttcgtgcgtgtcgtaatgatcgccatcacccgtcgccgcaagctgaag
gtgatcaacatcaggccgctgatccccttcagcccctatgacaagcacatccagttcatg
aaggcccgcttcttcggcgtcacggtctcggcgatcctgtcgctcgcctcggtggtcctg
ttcatccatccgggccttaactacggcgtcgatttccgcggcggcatccagatgtcggtc
aagaccaaggacgcggccgatctggcgacgttccgcgagggcctgaatacgctcggcctt
ggcgaaatcgcactgcagtccttcggcgacaacaacagcctccttgtccgcgcccagcgc
caggacggcggcgaagaggcgcagacggcggcagtgaccaagctcaaggccgaaatcgtc
aagatcgacccgagtgcgaccatcgaaggcaccgatgtcatcggtccgaaggtttcgggc
gagcttgcctgggccggcatcctatcggtcgtgatcgccagcctggcgatgctgttctac
atctggtatcgcttcgaatggccgttcgcggttggcgccatcgtgacgctggtgctcgac
gtcaccaaggcgatcggcttcttcgcgatcaccggcctcgatttcaacctaacggccatc
gccgcgatcctgacgcttgtgggatattcggtgaacgacaaagtcgtggtctatgaccgc
atgcgtgaaaacatgcggctctacaaatcgatgccgctgcgcgacatcatcgacaagtcg
atcaatgagaccctggcgcgaagcctatacaccaatgccaccgccttcctggcgctggtg
ccgatggcaatctggggcggcagcgccgtctccagcttcgcgatcccgatggtgttcggc
attctcgttgccggcgcctcgtcggtcttcatcgcggcgccgatcctgctgttcctcggc
gactggcgccgccgtcatgccaagccggttgccaatgatacggcatcgacagacggcaag
tcaggtaaggacaacaagcagattcctgccgcataa
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