Rhizobium sp. 11515TR: CKA34_29940
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Entry
CKA34_29940 CDS
T06097
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rhr
Rhizobium sp. 11515TR
Pathway
rhr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKA34_29940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Big_9
SprB
Cadherin_5
DUF4625
Motif
Other DBs
NCBI-ProteinID:
ASW10197
UniProt:
A0A248WGC4
LinkDB
All DBs
Position
p11515TR-B:694171..699789
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AA seq
1872 aa
AA seq
DB search
MKSVEQLATRTAGRKPCAGNNGFASENAPAKIQVCRAMRNARQLSKITTQSIDLGARACA
LLIRIVLLAALSCTGLLLATPDAAYAACTTLNFPDSHTSPSTSPMTSGGTLNVNIGTLCD
PVGLNPIGDPNVVLPQHGTITNYNAAAGSFTYTNSGDGATLDTFTLVDASAHPFTVNIAI
APAGLTPPAAGPVSATVNHGSTSNTITLNLSGGAASSVAVGTQASHGTATANGTSITYTP
TASYSGPDSFTYTATNAAGTSSPATVTITVSPPTITLGPATLTSGTVGTAYSQTVSASGG
TSSYTYAVTTGALPTGLSLSATTGVISGTPTAAGSFTFTVTATDSSTGSGPFNGSRSYTL
SISAPTISVNPASLSAGTVGTAYNQTITASGGTGSYNFNVTSGALPAGLTLSSSGTLSGT
PTAGGTFNFTVTARDSSTGTGAPFTGSKAYSLTIAAPTITISPATLTAATVGASYNQTIS
ASGGTSSYSFAVTAGSLPNGLTLSSGGVITGTPTAGGNFNFTVTATDSSTGTGPFNTSRP
YTLTVSAPTIAVAPTTLPSATVAASYGQTITASGGTSSYSFAVTAGALPAGLTLSSGGAL
TGTPTAGGTFNFTITATDSSTGIGPFTGSRAYSLSVAAPTITINPSSLSAVTAGTAYSQT
LTASGGTGSYTYSLSTGSLPIGVALSSTGVLSGTPISAGNFSFTIVARDGSTGTGPFTGA
QAYTLVVAAPAITIAPASLPGGTAGTAYSQTLTASGGTGPYTYSLASGNLPAGVALSSTG
TLIGTPTTAGPFNFTITATDSNHFTGSQAYSITISAPTITITPATLPGGTAGTAYSQTLT
ASGGTGSYTFSLTSGSLPPGVALSSVGALVGTPTTAGPFSFTITATDGNHFTGSQAYTVT
IGTPTIAITPATLPGGVAGTAYSQTLTASGGTGSYTFSLASGSLPPGVALSSAGALVGTP
TTAGPFNFTVTATDSNHFTGSQAYSVTIGAPTITVAPATLPPAGIGATYSQTFTASGGIG
SYSYALTAGALPAGLALSSGGILSGTPTAGGTFNITITATDSATFTGSRAYSLVVGAPTI
AIAPTTLPAATVAAAYNQTITASGGTSPYSYAITAGTLPAGLTLSSGGVLSGTPTASGTF
NVTITATDGSTGAGPFTGSRAYSLAVNVQPPIAGNVAATVAANSSANPITLAITGGAPAS
VTVATGASHGTATASGTSITYTPTPGYSGSDSFTYTATNASGTSAPATVSMTITAPNLTF
SPPSGALPAGVVTTAYSETITVSGGTSPYSYSATGTLPAGLALNHATGAVTGTPTTPGNY
SFSITATDANGATTSAAYTIAISPPPTTFVFSPAGGALPDAMAGEAYSQQITTTGGAGTK
IYSLASGSLPSGLVLNISTGQLNGPLAGGTEGDYNFTIQVRDGNGATGSASYSLRVKTRS
VTVLDMVVNVPAGSAPPDVYLNRGATGGPFTSAILAFVEPANAGTATIIQGQLAQAGPVT
TPVGWYLHYVLNPAYSGQVRVGYKLVSALGTSNTATVTYNVSYDAGKIADDISNLVHDFV
RSRQNMIANTIEVPGLLQRRQMEKATDPISARMTPSEEGMTLSFSTSLTQMRAAGGDPDA
ASAPFNVWIGGAFLTHNDKGSKDTNSSKWGSFAMVNMGVDYLISEHALIGLSFHYDRMTD
PTDEDAELTGNGWLAGPYASIELGKGVFWNGSLRYGGSNNTIDTQFWDGNFKTTRWMADT
SIEGQWYLDEDTTLSPKLRAIYFSEKVDDYTVKNGAGDAITIEGFNEDQFRISLGAEIAR
SFTLESGAKLTPKLGLTAGFSGLDGAGAFGAVTAGVSIQTMNFWMLDTSLLFNIEGDGQK
SVGAKVAASKKF
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgtcgaacagctggcgaccaggaccgcgggaagaaaaccctgcgctgggaac
aatggtttcgcatcggaaaatgctcccgcgaaaattcaagtctgccgtgcaatgcggaac
gcgaggcagctctcaaaaataacgacgcaatcgatagatctcggtgcgcgtgcttgcgca
ctgctgatcaggatagtgctgctcgctgccctatcctgcaccggtctactgctggcaact
ccggacgcggcgtacgcagcatgcactaccctcaacttccccgattctcatacgtcgccg
tcgacaagcccaatgacttccggcgggacgcttaacgtcaacatcggcacgctgtgcgat
ccagtcggtctcaatcccattggcgatccaaacgtagttcttccacagcacggcacgata
acgaactacaacgcagctgccggctcgttcacctacacgaacagcggcgacggagcgacc
ttagacacgtttaccttagtcgatgcgagcgcccatcctttcacagtaaatattgcgatc
gcgccagcgggattgacaccgcctgccgccggcccggtcagcgcaacagtaaaccacggc
agcacttccaatacgattacgttgaatttgtcgggaggagccgcctcctcagtggctgtc
gggacgcaggcgtctcacggaaccgccacggccaacggtacctcgatcacctataccccg
acagcaagttattcaggtccggatagcttcacctacaccgcaaccaatgcggccggcaca
tcctcgccggcgacggtgaccataacggtcagtccaccgacgattaccctcgggccggcg
acgctcacctcgggtactgtcggaacggcttatagccagaccgtcagcgccagcggcggc
accagctcttacacctatgcggttacaacaggtgccctgcccaccggcctgagtctgtcg
gcgacgactggcgtgatttccggcacgccaacggcagcaggctccttcactttcacggtg
accgcgaccgatagttcaaccgggtccgggccgttcaacggttcgagatcttatacttta
agcatttcagcgccgacgatttcggtcaatccggcctccttgtcagcaggcacggtcgga
actgcctataaccaaactatcacggcatcgggcggcaccggttcctataatttcaatgtc
acatcgggcgctctcccagccggcttgacgctctcctcctcaggcacgctttccggcacg
ccgacagcaggtggcacgttcaacttcacggtcaccgcgcgggatagttccaccggcacg
ggcgcaccattcacaggttcgaaggcttacagcctgaccattgcggcgccgacgatcacg
atctcgccggcgacgttgacggctgccaccgtcggtgccagctacaatcaaaccatctcc
gcatccggcggcaccagttcctatagctttgccgttacggccggttcgcttccgaacggc
ctgacactgtcatcgggaggtgtaatcaccggcacgccgacggcaggaggcaacttcaat
ttcactgtcacggcaacggacagttctacgggtacaggcccctttaacacctcaaggccc
tataccctgacggtttcagcgccaacgattgcggtcgcgccgaccacactcccatccgca
accgttgctgccagctacggtcaaaccattacagcgtcaggaggtaccagttcctatagt
tttgccgtcacagcgggcgctcttccagcaggcctgacgctctcatcgggaggcgcactc
actggcacgccgacggcaggcggcacgttcaatttcacaattactgcgaccgatagctcg
accgggatcgggccattcaccggctcaagagcctatagtttgagcgttgctgcgccgacg
atcactatcaatccttcgtcgctgtcagccgtaacggcgggaacggcctatagccagaca
ctgacagcctcgggcggtactggctcctacacctattcgctgtcgaccggctcgcttccg
ataggagtggcgctttcctcgactggcgttctttctggtacgccgatcagcgccgggaac
ttcagcttcactatcgtcgcaagggacggctccaccggcacaggtccctttacaggcgca
caggcctacacgctggtggttgccgccccagcgatcacgatcgcgccggcatctctgccg
ggtggcacagccgggactgcctatagccagacgctgacagcctcgggcggaaccggtccc
tacacctacagcctcgcaagcgggaaccttccggcgggcgtggcgctttcctcgaccggc
actctcatcggtacgccgacgaccgcagggcctttcaatttcaccatcaccgcaacagac
agcaaccactttaccggctcgcaggcctatagcatcacgatcagcgccccgacgatcacg
atcaccccggcaactctgcccgggggtacagccggaaccgcctatagccagacattgacg
gcctccggcggaaccggctcctatacctttagcctcacaagcggcagcctgcccccgggc
gtagcgctttcgtcggtcggtgcgctcgtcggtacgccgacaacagccgggcctttcagt
ttcaccatcaccgcaacagacggcaatcactttaccggttcgcaggcctataccgttacg
atcggcaccccgacgatcgcgatcaccccggcaacactgccggggggcgtggccggaacc
gcctatagccagacattgacggcctcgggcggaaccggctcctatacctttagcctcgca
agcgggagccttccgccgggcgtagcgctttcgtcggccggtgcgctcgtcggtacgccg
accaccgcaggacctttcaacttcacggtcaccgcaacagacagcaaccactttaccggc
tctcaggcctatagcgtcacgatcggtgctccaacgatcaccgttgcgccggcaacgctg
ccaccggccgggatcggggccacctatagccagaccttcaccgcctccggcggcatcggc
tcctacagctacgcactcacggcaggcgctttgccagccggtctcgccctgtcgtcaggc
ggcatactctccggcaccccgacagccggcggcaccttcaatatcacgatcacggcgacg
gacagcgctacgtttacgggctccagggcctacagcttggttgtcggcgccccaacgatt
gcaatcgcgccgaccacgttgccggctgcaaccgttgctgccgcctacaaccagaccatc
acggcttcaggcggcaccagtccttatagctatgcgataacggctggcactctgcccgcc
ggcctgacgctgtcgtccggcggtgttctctccggcactccgacggcatcgggcactttc
aacgtgacgattaccgcaacggacggttcgactggagccggtccctttacgggctccaga
gcctacagtctggcggtcaacgtccagccaccgatcgccggcaacgtcgcggcgaccgtt
gccgccaattcatcggccaatccgatcacactcgccatcacaggcggcgcgccggcctcg
gtcacggtagcaaccggggccagccatgggacagcaactgcctcgggaacgtccatcacc
tatacgccgacaccaggctatagcggatcggacagctttacctataccgcaaccaacgcc
tccggcacctctgcaccggcaaccgtgagcatgacgatcacggcgccaaatctgacattc
tcgccgccgagtggcgccttgccggccggcgtcgtcaccaccgcctacagcgagaccatc
actgtttcgggtgggaccagtccttatagctatagcgcgaccggcacgctgccggccggg
ctggcactcaaccatgcgacaggagccgttaccggcacgccgacgacgcccggcaattac
agcttctctatcaccgccaccgatgccaacggcgccacgacctctgcagcctatacgatc
gccatctcgccgccaccaacgacgttcgtattcagtccagcaggcggggcactccccgat
gcaatggcaggggaagcctacagccagcaaatcacgacaaccggcggcgcgggcacgaag
atctatagccttgcctccggcagcctgccgagcggcctggtgctcaacatctccaccggc
cagctcaacggtccgctcgcgggaggcacggaaggcgattacaatttcaccatccaggtt
cgcgatggcaacggcgcgaccgggagcgcctcctatagcctgagagtgaagacacgatcg
gttaccgttctggacatggtcgtcaacgtaccggcaggctccgcgcctcccgacgtctac
ctcaatcgcggtgcaaccggcggcccgttcacgtccgcgatcctcgctttcgtggagcct
gccaatgccggcacggcgacgatcatccaggggcagctggcgcaggcgggcccggtcacc
actcccgttggctggtacttgcactatgtgctgaacccggcctattccggtcaggtccgc
gtcggctacaagcttgtcagcgcgcttggaacctccaatacagccaccgtcacctacaat
gtcagttacgacgccggtaagattgccgacgacatcagcaatctcgtgcatgacttcgta
cgatcccggcagaacatgatcgccaacacgatcgaggtgccggggctcctgcagcgtcgg
cagatggagaaggcgacggacccgatcagcgcgcgcatgacaccgtcggaagagggcatg
acgctcagcttctccaccagcctcacgcagatgcgggcggcaggcggcgatccggatgcg
gcgtccgccccgttcaacgtctggatcggcggcgccttcctgacccataacgacaagggc
agcaaggacaccaacagctcaaaatggggcagcttcgccatggtcaacatgggcgtggac
tatctgatctcagaacatgcactgatcgggctctccttccactatgaccgcatgacggat
ccgaccgatgaggacgcggaactgacgggcaatggctggcttgccggaccctatgcctcg
atcgagctcggcaagggcgtattctggaacggcagcctgcgctatggcggctcgaataac
accatcgacacccagttctgggacggcaatttcaagaccacgcggtggatggccgatacg
tcgatcgagggtcaatggtacctcgatgaggacacgacgctgtcgccgaagctcagggcg
atctacttctccgaaaaggtcgacgactatactgtcaagaacggtgccggcgatgcgatc
accatcgaaggcttcaacgaggaccaattccgcatcagtcttggcgccgagatcgcaaga
tccttcacgctcgaaagcggcgccaagctgacgccgaagctcgggctgaccgctggcttc
tccggtctcgacggagccggtgccttcggtgcagtcaccgccggcgtctccatacagacc
atgaacttctggatgctcgacaccagcctgctcttcaacatcgaaggcgacgggcagaaa
tccgtcggcgccaaggtcgccgcaagcaagaaattttga
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