Rhodococcus fascians PBTS 2: A3Q41_01804 Help Entry A3Q41_01804       CDS       T05030                                  Name (GenBank) hypothetical protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism rhs  Rhodococcus fascians PBTS 2 Pathway rhs03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:rhs00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     A3Q41_01804  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rhs03400]     A3Q41_01804 Enzymes [BR:rhs01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      A3Q41_01804 DNA repair and recombination proteins [BR:rhs03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      A3Q41_01804 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  AMY23107 UniProt:  A0A143QL47 LinkDB All DBs Position complement(1822740..1825055) Genome browser AA seq 771 aa AA seqDB search MATLEIEGRKVSVTNLDKVLFPETSTTKSDIIEYYAAIAPAMLPHVAGRAVTRKRWPNGV EQSSFFEKNLAASAPDWLDRRSMQHSDRVVTYPLFSTAADLVWLGQQAAIEAHVPQWRFD GTEPGPATRMVFDLDPGDDVDLARCAEVACEIRDLIADIGMTAYPVTSGSKGIHLYVPLD KPLSTSGASTVAKRVATLLEERSPDRVTATMAKAKRTGRVFVDWSQNNGKKTTVAPYSLR GRSLPTVAAPRTWEELESRGLQQLRFEEVLERFHETGDLLADLDPKPAAEEHDTSGTDKL GKYRSMRSSDRTPEPIPKTAEPQGNDDTFVIQEHHARRLHYDFRLEHDGVLVSWAVPKNI PVETGQNRLAVHTEDHPLEYATFSGRIPKGEYGGGDVSIWDSGTYELEKWRDDEVIVVLH GAKARGRFALIRTKGNQWLMHLMKDQPGQDSAHKKSQESPSTDKPVLKNISPMLATAGDI LDLPEDEWSFEGKWDGFRIVAELTHGSMTLRTRSGNDYTEKFGAIGSLAEDLADHDAVID GEVVVFDSNGISSFEKLQNAARDDIRFIAFDLLHLDGTSLVRKKYSDRRRLLELLTTGLD SVLVPPLLTGSAADAIAESRERGWEGVVAKRTDSIYQPGKRAHTWIKYKNWRTQEVVIGG WRRGQGRRSGGFGSLLMGIPDGDGLRYVGRIGTGFDDRALDSLAAALAPLETSESPFSTS LPTADRRGAVWVEPVLVGEVRYYEATESGHLRHPSWRGLRPDKSPTDVVPE NT seq 2316 nt NT seq  +upstreamnt  +downstreamnt atggccacgctcgagatcgaaggccgaaaggtctccgtcaccaacctcgacaaggtgctg ttcccagaaaccagcaccaccaaaagcgacatcatcgagtactacgctgccatcgccccg gcgatgctgccgcacgtcgcaggacgcgccgtgacccgcaagcggtggccgaacggcgtc gaacaatcctcgttcttcgagaagaatctcgccgcatccgcacccgactggctcgaccgc cgatccatgcagcactccgaccgagtcgtcacctacccgttgttctccaccgcagcggat ctcgtgtggctcgggcagcaggcggccatcgaagcgcacgtgccgcaatggcgattcgac ggcaccgaacccggccctgccacccgcatggtcttcgacctcgatcccggcgacgacgtc gacctcgcccgatgcgctgaggtggcctgcgaaatacgtgacctcattgcagacataggc atgaccgcgtacccggtcaccagcggcagcaagggaattcacctgtacgtaccgctggac aaaccgctgtcgacgtccggcgcatccaccgtcgccaaacgcgtcgccaccctgctcgaa gaacggtcaccggatcgggtgaccgccacgatggcgaaagcgaagcgcacgggtcgagtg ttcgtcgactggagtcagaacaacggaaagaagacaaccgttgctccgtactcacttcgg ggccgttccctacccaccgtcgcggccccccgtacctgggaggagctcgaatcgcgaggg ctgcaacaacttcgattcgaggaggttctggaacgattccacgaaaccggcgacctactc gccgatctcgacccgaaaccggcagcggaagaacacgacacctccggcacggacaagctc ggcaagtaccgcagcatgcgtagctcggaccgaactccggagcccatcccgaaaaccgcc gagccccagggtaacgacgatacgttcgtgattcaggaacatcatgcccgacgcctgcac tacgacttcaggctcgaacacgacggagtcctggtgtcgtgggccgtgcccaagaacatc ccggtcgagaccgggcagaaccgtctggccgtccacaccgaggaccacccgctggaatat gcgacgttctccggacgaatccccaagggcgagtacggcggcggtgacgtctcgatctgg gacagcggaacctacgaactcgagaagtggagagacgacgaagtcatcgtcgttctgcac ggagccaaagcacgcggcaggttcgccctcatccgcaccaagggcaaccagtggctcatg cacttgatgaaagaccaacccggacaggacagtgcacacaagaaaagccaggagagcccg tcgacggacaagccggtgctgaagaacatctcaccgatgcttgcaaccgcgggggacata ctcgatctacccgaggacgagtggtcgttcgagggtaaatgggacggcttccgcatcgtc gcggaattgactcacggttcgatgaccctgcgcacccgaagcggaaacgactacaccgag aagttcggagccatcgggtctctcgccgaggacctggccgatcacgacgccgtcatcgac ggtgaagtggtcgtcttcgacagcaacggcatcagcagcttcgagaagctacagaacgcc gcccgcgacgacatccggttcatcgccttcgacctgctccatctcgacggcacgtccctc gtgcgcaagaagtactccgaccggagacgattgttggaactgctcaccaccggcctcgac tcggttctggtgccgccgttgttgacaggttcggctgccgacgccatcgccgagagccgt gagcgggggtgggagggagtcgtcgccaagcggaccgattcgatctaccagccgggcaag cgcgcccacacgtggatcaagtacaagaactggcgcacgcaagaagtggtgatcggcggt tggcgacgcggccaggggcgtcgttccggcggattcggctcactgctgatggggatcccc gacggcgacggtcttcgctacgtcggtcgcatcggcaccggtttcgacgatcgcgcgctc gattcactggccgcagcgctggctccgctggaaacgtcggagagtcctttctccacgtcg cttcccactgccgacagacgcggtgccgtatgggtggaaccggttctcgtcggagaagtg cggtactacgaggcgacagaatccggccatcttcgccacccgagctggcgcggattgcga ccggacaagtcgccgacggacgtcgttcccgagtag

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