Rhodococcus fascians PBTS 2: A3Q41_04127
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Entry
A3Q41_04127 CDS
T05030
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhs
Rhodococcus fascians PBTS 2
Pathway
rhs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3Q41_04127 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhs03400
]
A3Q41_04127 (mutM)
Enzymes [BR:
rhs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A3Q41_04127 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A3Q41_04127 (mutM)
DNA repair and recombination proteins [BR:
rhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A3Q41_04127 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_recom
DUF6487
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AMY25408
UniProt:
A0A143QRN7
LinkDB
All DBs
Position
4336786..4337604
Genome browser
AA seq
272 aa
AA seq
DB search
MPELPEVENARQVVEKALGRVIVDIDDTDSFECRPHMPGDIAHALKGGKLTEACRRGKAM
WCETVTADGSSGPTLGIHLGMGGRVIVTAPDGDRTSQYGGGDPHVGERDTDKPEWTRFAM
TFEDGGQLRLFDKRRLGRVRLEPDIDALGPDAAEITRDDFRHRIGSSGAPLKARLLDQAA
IAGVGNLLADEVLWQSEQSPSRRAKTLTTEELDELRVVLRRAIRSAIKKGGVHTGEIIPF
RKADAACPRCGAPMTRGTVGGRTTWWCSREQS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccccgaagtcgaaaacgctcgacaggtcgtcgagaaagccctcggacgc
gtcatcgtcgatatcgatgacaccgactcgttcgagtgccgtccacacatgccgggcgat
atcgctcacgccctgaagggcggcaagctcaccgaggcatgtcgacgtggcaaggcgatg
tggtgcgaaaccgtcaccgccgacgggtccagcggtccgacgctgggaatccatctcgga
atgggcggccgcgtcattgtcaccgctcccgacggcgatcgcacgtcgcagtacggaggc
ggcgatccgcacgtgggcgagcgcgacaccgacaagcccgagtggacgcgctttgccatg
acgttcgaagacgggggtcagctccggctcttcgacaagcgccggctcggccgagtgcgc
ctcgaacccgatatcgatgcgttggggcccgatgctgcggagatcacgcgcgacgacttc
cggcaccgaatcggttccagcggagcacctctgaaagcacgtttgctggaccaagcagca
atcgcaggcgtcggcaatctgttggccgacgaggtgctgtggcagagcgagcaatctccg
tccagacgggcaaagaccctcaccaccgaggaactcgacgagctccgcgttgttctgcgt
cgcgccatcaggtcagcgatcaagaagggtggcgtgcacaccggtgagatcatcccgttc
cgcaaggcggacgcggcgtgcccacgatgcggtgctccgatgactcgcggaacggtgggc
ggccgcaccacgtggtggtgttcgcgcgagcaatcctga
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