Rhodococcus sp. PBTS 1: A3Q40_03914 Help Entry A3Q40_03914       CDS       T05182                                  Name (GenBank) hypothetical protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism rhu  Rhodococcus sp. PBTS 1 Pathway rhu03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:rhu00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     A3Q40_03914  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rhu03400]     A3Q40_03914 Enzymes [BR:rhu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      A3Q40_03914 DNA repair and recombination proteins [BR:rhu03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      A3Q40_03914 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S DNA_ligase_OB_2 mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  AMY21262 UniProt:  A0A143QFK0 LinkDB All DBs Position complement(4177356..4179653) Genome browser AA seq 765 aa AA seqDB search MPPAGSTRREIDGHTLAFTNPDKVLYPETGTTKAEVIDYYLAVADAMLPHLAGRPVTRKR WPNGVDHPAFFEKNLAASAPDWLDRRRIHHSDRVVVYPVFHGPADLAWLGQQAALEAHVP QWTFDRDEQGKATRIVFDLDPGDDVDLDTCATVACAVRTMVTDIGLTAFPLTSGSKGIHL YVPLEKPVTSAGASTVAKRVATLLEGTMPDLVTASMSKALRPGKVFLDWSQNNGKKTTIA PYSLRGRSRPTVAAPRTWEEIEGGGLTQLAFTEVIDRLHRDGDLLADLDAAVPGGTADRL GPYRGKRTTSRTPEPVPTGTTPESRSAATTFVIQEHHARRLHYDFRLERDGVLVSWAVPK NLPTDTTSNHLAVHTEDHPLDYATFEGTIPAGEYGGGEVTVWDHGTYIEEKWRDDEVIVT LTGERVSGRYALIRTGGDQWLVRRTKTTASGVPQGDTALPTRVRPMLATAGELDALDADQ WSFEGKWDGVRVVATVDHGRTLLESRTGQDLTRRYAGITALGADLADHVVVLDGEAVVYR ADGVTSFEALQDAHPDDVQYICFDILHLDGTDLTNKKFADRRRILELLLTGIESATLSPL MAGTPAGALAESERRGWEGIVAKRRDSVYEVGRRSTAWIKVKNWRTQEVVIGGWRAGKGG RAGSIGSLLLGVPEGDGLRYVGRVGTGFTERARADLLDRLRPLARDDSPFDRPLPAVDRK DATWTEPALVGEVRFFEWTEGGSLRHPSWRGLRDDKSPADVVREP NT seq 2298 nt NT seq  +upstreamnt  +downstreamnt atgccacccgccgggtcgacgcgtcgcgagatcgatgggcacacgctggccttcaccaat ccggacaaggtcctgtatccggagaccggcaccaccaaggccgaggtgatcgactactac ctcgccgtggccgacgccatgctgccgcatctggccggtcggccggtcacccgcaagcgg tggccgaacggcgtcgaccacccggcgttcttcgagaagaacctcgccgcatcggctccg gactggttggaccgccgccgcattcaccattcggaccgcgtcgtggtgtacccggtgttc cacggccccgccgacctcgcgtggctcgggcagcaggcggccctcgaggcgcacgtcccc cagtggaccttcgatcgcgacgagcagggcaaggccacccgcatcgtcttcgacctcgat cccggcgacgacgtcgacctcgacacgtgcgcgacggtcgcgtgcgcggtgcggaccatg gtcaccgacatcggactgaccgcgttcccactcacgagcggcagcaagggaattcacctc tacgtgccgctggagaagccggtcacctcggccggggcgtccaccgtggccaagcgggtg gccaccctgctcgagggcacgatgcccgacctcgtgacggcgtcgatgtccaaggcgctg cgtcccggcaaggtgttcctcgactggagccagaacaacggcaagaagaccaccatcgcg ccctactcgctgcgcggccgcagccgacccaccgtggccgccccgcggacctgggaagag atagagggcggcgggctgacccaactcgcgttcaccgaggtgatcgaccgcctgcaccgc gacggggacctgctggccgatctggacgccgccgtccccgggggcaccgccgaccggttg ggaccgtatcgcggcaagcgcaccacgtcgcgcacgcccgagcccgtcccgaccgggacg acaccggaatctcgttccgccgcaaccacgttcgtcatccaggaacatcacgcgcgccgg ttgcactacgacttccgactcgaacgcgacggcgttctcgtctcgtgggccgtgccgaag aacctgcccaccgacaccacgtcgaaccacctcgccgtccacaccgaggaccaccccctc gactacgccacgttcgagggcacgattccggcgggcgagtacggcggcggcgaggtcacc gtctgggatcacggcacctacatcgaggagaagtggcgggacgacgaggtcatcgtgacc ctgaccggcgaacgcgtctccggccgctacgccctgatccggaccggcggcgatcagtgg ctggtgcggcggaccaagaccaccgcctccggcgtcccgcagggtgacacggccctgccc acgcgcgtgcgtccgatgctcgcgaccgccggcgagctggacgcgctcgacgccgaccag tggtcgttcgagggcaagtgggacggcgtgcgcgtcgtcgccaccgtcgaccacgggcgc acgttgctcgagagtcgcacgggacaggacctcacccgtcgctacgcggggatcacggcg ctgggggccgacctggccgaccacgtcgtggtcctcgacggcgaggccgtggtgtaccgc gccgacggcgtcaccagcttcgaggcgctccaggacgcccaccccgacgacgtgcagtac atctgcttcgacatcctccatctcgacggtaccgacctgacgaacaagaagttcgccgac cgtcgtcgcatcctcgagctgcttctcaccggaatcgagtcggccaccctctctcccctg atggccggtaccccggccggcgcgctggccgagagcgaacgacgcgggtgggagggcatc gtcgccaagcgccgcgattccgtctacgaggtcggccgtcgcagcaccgcgtggatcaag gtgaagaactggcgcacgcaggaggtggtgatcggcggctggcgcgccgggaagggcggg cgggccggcagcatcggttccctgctgctcggtgtgcccgagggcgacgggctgcgatac gtgggtcgggtcggcaccgggttcaccgagcgcgcccgcgcggacctgctcgatcggctg cggccgctggcgcgggacgactctccgttcgaccgtccgttgccggccgtggatcgcaag gatgcgacgtggaccgaacccgcgctggtcggcgaggtgcggttcttcgagtggaccgag ggcggatcactgcgtcatcccagttggcgcgggctgcgcgacgacaagagtcccgcggac gtggtgcgggagccctga

DBGET integrated database retrieval system