Rhodococcus sp. WMMA185: BFN03_07020
Help
Entry
BFN03_07020 CDS
T04814
Name
(GenBank) restriction endonuclease
KO
K19789
DNA repair protein RadD
Organism
rhw
Rhodococcus sp. WMMA185
Brite
KEGG Orthology (KO) [BR:
rhw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhw03400
]
BFN03_07020
DNA repair and recombination proteins [BR:
rhw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BFN03_07020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_34
AAA_30
PALP
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AOW94558
UniProt:
A0A1D8TA94
LinkDB
All DBs
Position
1552479..1554098
Genome browser
AA seq
539 aa
AA seq
DB search
MDFNALMARADEETLRDLVGPSVTRLLVRLDPDLARPSKLRELLKAQRTPSELIRDPKAR
TALVRMLSRGQAEALVRGFGLDPTNGSADPYELLTSLTLRKGSAREAKFHRLFGVAVDEE
VSRNLICADKSTEPRYPLFHHQRVAAAEVDVALRDGPGRAVLHMPTGSGKTRTAMNVVCD
YLRAEEPRMAVWLAYSEELCEQAASEFERAWAALGNRTLKVFRFWGSNPIDIEGARDGLV
VCGLDKMYSSIRSSYQTWSRLADRSRLVIIDEAHQALAPTYKDVLELLVDRHEKTRLLGL
TATPGRTWNDLDEDRRLSNFFANEKVTLKVPGYANPVDYLIDEGYLARTEFESLTYSGDA
ALGPRDLRQIERATDIPTEVLEQLAGDDTRNLLIVTRVEKLILSHSRIIVFATTANHSNT
LATVLAARGVQAASVTSKTRPSERQRLIEAFRSDEAEPQVLCNYGVLTTGFDAPRTSAAI
IARPTKSLVLYSQMVGRATRGVRAGGNQEALVVTIVDTSLPGFGGMSEAFTNWEDVWDA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ctggacttcaacgcgctcatggctcgcgcagacgaggagacgctgcgcgacctagtgggg
ccgagtgttactcgcttgcttgttcgccttgaccccgacctcgcccgaccgagcaagctc
cgtgagctgttgaaagcacaacggaccccgagtgaactcatcagagatccgaaagctcgc
actgccttggttcgaatgctctcgcggggtcaggcggaagcgctggtcagaggatttggc
ctcgatccgacaaatggttctgcggacccgtacgaactcctgacatccttgacgcttcgc
aagggcagtgccagggaagcgaagttccacaggctatttggcgtcgccgtcgatgaggaa
gtcagccggaacttgatctgtgccgacaagtcgaccgaaccgagataccctctcttccat
catcaaagagtggcggcggcagaggtggacgttgccctacgtgacggtcccggccgcgct
gtacttcatatgcccacgggttcaggcaagacacgaacagcgatgaacgtcgtatgcgac
tatctgcgtgcagaagagccacgcatggccgtgtggttggcttatagtgaagagctctgt
gagcaggcagcttcggaattcgagcgcgcctgggctgctctcgggaatcgcacgctcaag
gtctttcggttttggggttccaacccaattgatatcgaaggggctcgagacggcctcgtc
gtgtgcggtttagacaagatgtatagttcgattcggtcgagctaccagacgtggtctcga
ctagcggacaggtctcgcctcgtgatcattgacgaagcacaccaagctctggcaccgacg
tacaaggatgtacttgagctgttggtggacaggcatgagaaaacgcgtctgcttgggctc
acagccacacccggccgtacgtggaatgatctggacgaagatcgaagactgtcaaacttt
ttcgccaacgagaaggtgaccctgaaggtaccgggctacgccaatccggtcgattatctg
atcgatgagggttaccttgcgcgtactgagtttgaatcacttacatattcgggtgatgcg
gccctcggtcccagagatctccgacagattgagcgggcgaccgatattccgacggaggtt
ctcgaacaactagctggggacgacactcgaaacctgttgattgttacgcgtgtggaaaag
ctgatcctgagccacagtcggatcattgtcttcgcgactactgcaaaccattcgaatact
ctcgcaaccgtgctggctgctcgtggagtacaggcagcgtcagtgacgagcaagacacgt
ccctccgaacgacaacgcttgatagaggctttccgttctgatgaggctgaaccgcaggtt
ctctgcaactatggcgtcctcacaacaggattcgatgccccccgaaccagtgcagcgata
atagcccgaccgaccaaatctctcgtgctgtacagccagatggttggtcgagcgacacgc
ggggtgcgagctgggggaaaccaagaggcccttgtggttacaatcgtcgacacctcgctg
ccgggtttcggcggtatgtccgaagcatttacaaactgggaagatgtgtgggatgcctga
DBGET
integrated database retrieval system