KEGG   Rhodococcus sp. WMMA185: BFN03_07020
Entry
BFN03_07020       CDS       T04814                                 
Name
(GenBank) restriction endonuclease
  KO
K19789  DNA repair protein RadD
Organism
rhw  Rhodococcus sp. WMMA185
Brite
KEGG Orthology (KO) [BR:rhw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhw03400]
    BFN03_07020
DNA repair and recombination proteins [BR:rhw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     BFN03_07020
SSDB
Motif
Pfam: ResIII DEAD Helicase_C SWI2_SNF2 AAA_34 AAA_30 PALP AAA_22 Terminase_6N
Other DBs
NCBI-ProteinID: AOW94558
UniProt: A0A1D8TA94
LinkDB
Position
1552479..1554098
AA seq 539 aa
MDFNALMARADEETLRDLVGPSVTRLLVRLDPDLARPSKLRELLKAQRTPSELIRDPKAR
TALVRMLSRGQAEALVRGFGLDPTNGSADPYELLTSLTLRKGSAREAKFHRLFGVAVDEE
VSRNLICADKSTEPRYPLFHHQRVAAAEVDVALRDGPGRAVLHMPTGSGKTRTAMNVVCD
YLRAEEPRMAVWLAYSEELCEQAASEFERAWAALGNRTLKVFRFWGSNPIDIEGARDGLV
VCGLDKMYSSIRSSYQTWSRLADRSRLVIIDEAHQALAPTYKDVLELLVDRHEKTRLLGL
TATPGRTWNDLDEDRRLSNFFANEKVTLKVPGYANPVDYLIDEGYLARTEFESLTYSGDA
ALGPRDLRQIERATDIPTEVLEQLAGDDTRNLLIVTRVEKLILSHSRIIVFATTANHSNT
LATVLAARGVQAASVTSKTRPSERQRLIEAFRSDEAEPQVLCNYGVLTTGFDAPRTSAAI
IARPTKSLVLYSQMVGRATRGVRAGGNQEALVVTIVDTSLPGFGGMSEAFTNWEDVWDA
NT seq 1620 nt   +upstreamnt  +downstreamnt
ctggacttcaacgcgctcatggctcgcgcagacgaggagacgctgcgcgacctagtgggg
ccgagtgttactcgcttgcttgttcgccttgaccccgacctcgcccgaccgagcaagctc
cgtgagctgttgaaagcacaacggaccccgagtgaactcatcagagatccgaaagctcgc
actgccttggttcgaatgctctcgcggggtcaggcggaagcgctggtcagaggatttggc
ctcgatccgacaaatggttctgcggacccgtacgaactcctgacatccttgacgcttcgc
aagggcagtgccagggaagcgaagttccacaggctatttggcgtcgccgtcgatgaggaa
gtcagccggaacttgatctgtgccgacaagtcgaccgaaccgagataccctctcttccat
catcaaagagtggcggcggcagaggtggacgttgccctacgtgacggtcccggccgcgct
gtacttcatatgcccacgggttcaggcaagacacgaacagcgatgaacgtcgtatgcgac
tatctgcgtgcagaagagccacgcatggccgtgtggttggcttatagtgaagagctctgt
gagcaggcagcttcggaattcgagcgcgcctgggctgctctcgggaatcgcacgctcaag
gtctttcggttttggggttccaacccaattgatatcgaaggggctcgagacggcctcgtc
gtgtgcggtttagacaagatgtatagttcgattcggtcgagctaccagacgtggtctcga
ctagcggacaggtctcgcctcgtgatcattgacgaagcacaccaagctctggcaccgacg
tacaaggatgtacttgagctgttggtggacaggcatgagaaaacgcgtctgcttgggctc
acagccacacccggccgtacgtggaatgatctggacgaagatcgaagactgtcaaacttt
ttcgccaacgagaaggtgaccctgaaggtaccgggctacgccaatccggtcgattatctg
atcgatgagggttaccttgcgcgtactgagtttgaatcacttacatattcgggtgatgcg
gccctcggtcccagagatctccgacagattgagcgggcgaccgatattccgacggaggtt
ctcgaacaactagctggggacgacactcgaaacctgttgattgttacgcgtgtggaaaag
ctgatcctgagccacagtcggatcattgtcttcgcgactactgcaaaccattcgaatact
ctcgcaaccgtgctggctgctcgtggagtacaggcagcgtcagtgacgagcaagacacgt
ccctccgaacgacaacgcttgatagaggctttccgttctgatgaggctgaaccgcaggtt
ctctgcaactatggcgtcctcacaacaggattcgatgccccccgaaccagtgcagcgata
atagcccgaccgaccaaatctctcgtgctgtacagccagatggttggtcgagcgacacgc
ggggtgcgagctgggggaaaccaagaggcccttgtggttacaatcgtcgacacctcgctg
ccgggtttcggcggtatgtccgaagcatttacaaactgggaagatgtgtgggatgcctga

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