Rhodococcus sp. WMMA185: BFN03_13610 Help Entry BFN03_13610       CDS       T04814                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism rhw  Rhodococcus sp. WMMA185 Pathway rhw03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:rhw00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     BFN03_13610  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rhw03400]     BFN03_13610 Enzymes [BR:rhw01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      BFN03_13610 DNA repair and recombination proteins [BR:rhw03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      BFN03_13610 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S Motif Other DBs NCBI-ProteinID:  AOW93338 UniProt:  A0A1D8T6P7 LinkDB All DBs Position complement(3031128..3033431) Genome browser AA seq 767 aa AA seqDB search MYWRREVCMTAGTRQITIGGHRLSLTNLGKVLYPDSGTTKGEVVDYYTRIAPAMLPHIAD RAATRKRWPNGVDSESFFEKNLASSVPAWLERRSLEHSDRTVQYPLLNSVAALAWAGQQA ALELHVPQWRFEGQRRGSATRIVFDLDPGPGAGLPECAEVARAVRDLVANLGWTTFPVTS GSKGIHLYVPLDRKLEGAGPSTVAKQVATGLEALRPELVTASMAKAVRAGKVFVDWSQNN PSKTTIAPYSLRGRSQPWVAAPRTWDELDDPDLRQLRFEEVLERWESDGDLLAGLDPPWE GAATLAEYRRKRDPGRTPEPMPSVVRPGDNSRFVIQEHHARRLHYDLRLERDGVLVSWAV PKNVPTTPSENRLAVRTEDHPLEYLTFAGTIPKGEYGGGVMTIWDSGTYDAEKWRDDEVI VRLRGEKARGRFALIHTKGDQWLMHLMKNQEASGPGSSDLPRGLSPMLATPGTLDGLESD AWAFEGKWDGVRVIAEVSGGRLRLMSRTGNDKTGDYPRLGWLAEALGDHEVVLDGEVVAF DDRGVSDFGLLQQGGEPHFLAFDVLYLDGVSLLRKKYTDRRRVLEALAAKVDDLVVPPQL HGPAQEALDFSRGKGWEGVVAKRRDSVYLPGKRGSSWIKVKNWRTQEVVIGGWRRGRGAR SEGIGSLLLGIPDSGGLRYVGRVGTGFTQRDLRELASMLHPLETATSPFIDTLPTADRRD AVWVTPTLVGEVRFMEWTESGRLRHPSWRGLRDDKAPEDVKVEVDRV NT seq 2304 nt NT seq  +upstreamnt  +downstreamnt atgtattggcggcgggaggtgtgcatgacggcggggacccgacagatcacgatcggcgga catcgactgtcgctgaccaacctcggcaaggttctctacccggactcgggaacgacgaag ggtgaggtggtcgactattacacccggatcgcacccgccatgctcccccatatcgccgac cgtgccgccacgcgcaagcggtggcccaacggggtggacagcgagtcgttcttcgagaag aacctggcgtcctcggtgcccgcgtggctcgagcggcggtccctcgagcactccgatcgc actgtgcagtaccccctgctgaattcggtcgctgcccttgcctgggcagggcagcaggcc gccctcgaactgcacgtgccgcaatggcgcttcgaggggcagcgacgtgggtcggccacc cgtatcgtgttcgacctggatcccggtccgggagcggggctgcccgagtgcgcggaggtg gctcgggcggtgcgggatctcgtcgcgaaccttggctggaccacatttccagttaccagc ggtagcaagggtattcatctatacgtaccgctcgaccgcaagctcgaaggtgcgggtccg tcgactgtagcgaagcaggtggcgacgggcctcgaggcactgcgtcccgaactcgtcacc gcaagcatggcgaaggcggtgcgcgccggcaaggtattcgtcgactggagccagaacaac ccgtcgaagaccacgatcgcgccctattcactgcggggccgctcccagccgtgggtcgcg gcgccgaggacctgggatgaactcgacgaccccgatctacggcagttgcggttcgaggag gtcctcgaacgatgggagtcggacggcgacctgcttgccggtctcgacccgccgtgggag ggtgcggccaccctcgccgagtatcgacgcaagcgcgaccctgggcgcacacccgagccg atgccgtccgtggtgaggcccggagataacagcagattcgtcatccaggaacaccacgct cggcgtcttcattacgatctccgcctcgaacgcgacggtgtcctcgtgtcctgggcggtg cccaagaacgtgccgactacgccgtcggagaaccgactggccgtgcgcaccgaagaccat ccgctcgagtacctcacgttcgcgggaaccatcccgaagggtgagtacggcggcggcgtg atgaccatctgggactcggggacgtacgacgcagagaaatggcgggacgacgaggtgatc gtccggttgcgcggtgaaaaggcaaggggccgtttcgcgctgatccacaccaagggtgac cagtggctgatgcacttgatgaagaaccaggaagcctccggacccggatcgtcggacctg ccgcgtgggctctcacccatgctcgccactcccgggaccctcgacggactggaatccgac gcgtgggcgttcgaaggaaaatgggatggggtcagagtgatcgccgaggtcagtggtggt cgtctgcggttgatgagccggacgggcaacgacaaaaccggtgactacccgcgattgggt tggctggcagaggctctcggtgatcacgaggtggtcctcgatggcgaggtggtcgcgttc gacgatcgaggggtatccgacttcggtctgttgcagcagggaggcgagccgcactttctg gcattcgacgtgctgtacctcgacggggtgtcgttgctgcgtaagaagtacaccgaccgg cgccgggtcctcgaagcgttggcggccaaggtggatgacctggtggttcccccgcaactg cacggtcctgcgcaggaggcgctggatttcagtcgaggcaaggggtgggaaggcgtcgtc gccaagcgccgcgactcggtgtatctgccgggcaagcgcgggtcgagttggatcaaggtg aagaactggcgcacacaggaagtcgtgatcggagggtggcgccggggtcggggcgcgcgg tcggaggggatcgggtcgttgttgctcggcatccccgacagcggtggacttcgctacgtc ggtcgggtgggaaccggattcacccagcgcgacctacgggaactcgcgtcgatgctgcac ccgctcgaaactgcgaccagtccgttcatcgacaccctgcccaccgccgaccgcagggat gcggtgtgggtgacgcccacactggtaggggaggtgcggttcatggaatggaccgaatcc gggcggctacgacacccgagttggcgcggcctcagggacgacaaggcgcccgaggacgtg aaggtagaggtggatcgagtctga

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