Rhodoferax koreense: RD110_20320
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Entry
RD110_20320 CDS
T04721
Name
(GenBank) hypothetical protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
rhy
Rhodoferax koreense
Pathway
rhy00052
Galactose metabolism
rhy00511
Other glycan degradation
rhy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RD110_20320
09103 Lipid metabolism
00600 Sphingolipid metabolism
RD110_20320
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RD110_20320
Enzymes [BR:
rhy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
RD110_20320
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Glyco_hydro_2
Malectin
BetaGal_ABD2
DUF4982
CopC
Motif
Other DBs
NCBI-ProteinID:
APW40829
UniProt:
A0A1P8K4A1
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All DBs
Position
complement(4378174..4380858)
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AA seq
894 aa
AA seq
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MACGGGGGGNGAGAVSVDALRNQTSLAKNWKFVQDDNLTDTQALAASGTNWATVNLPHTW
NAIDAATTAQSTPTTPDYKRGLGWYRLEFDAAAAAGKTRWLQFDAASMVADVWLNGVKLG
QHRGAFTAFRFDVTSGLKAGKNVLLVKTDNSAAANDASPTAIAPLGGDFNVAGGLYRTVS
LIETPSTAHIALDDLGSSGVFAKTTSLTGTSATVNVLAKLKNDSSTDGTYTVTASLVEAD
GKTLKKSSTAQVTLKAGQSAPLAQDINVDQPHLWQGLSDPYLYHLVVELKDSTGAAVDRV
VQRFGVREMRFDANQGFFLNGKSIPLHGVNIHQDELGKAWAITNEDIDQTFAFIKEVGAN
TVRMAHYPHSDYTVQQADKLGVVVWAELPLVNATSKASLVDPETTGFAENARVQLQELIR
QKFNNASIGLWSIANEVTGGNDARNNVQPLLKSLNQVAKSEDPTRATTLANQVTRNGDVV
LPDTLTQTGYTDTYGVNRYFQWYYGTSETQLGENLDALHAQIPTQPIGVSEYGAGNAITH
HTDNVFGGRVCSRDTSGFTRICYQPEGYANYVHEKAYNEIVKRPYLMGTWIWNMFDFGSG
NRHEGDIGQTNTKGIVTFGRDVKKDVFYFYKANWTQTPVTYITSRRYTQRAYPVTDIKVY
SNASSITLQVNGQAVGSKAAADCPLKVCEFKNVALQAGNNSVVVNGTHGSETVTDAVSWN
LAQENATNFFIAAGGLTTGFLSNDPLLGQHRYGSDNFFVGGELPPITGRSSVGLTGAVAI
NGLGTTTIPETGRVWDMWREGNAFSYNLPLANGSYMVTLGFLEPTATANGARVFNVNANG
ANQIANLDVLQAAGARNTAIVRKFPVTVSNGRLLLDFQGVTGKAIVSNIAVVKQ
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
gtggcctgcggtggcggcggcggtggcaacggtgcgggcgcggtgtccgtggacgcgctg
cgcaaccagacctcgctggccaagaactggaagttcgttcaggacgacaacctgacggac
acccaggcactggccgccagcggtaccaactgggcgacggtgaacctgccacacacctgg
aacgcgatcgacgccgccaccacggcgcagtcgacgccgacgacgcctgactacaagcgc
ggcctgggctggtaccgcctggaattcgatgccgccgcagcggcaggcaagacacggtgg
ctgcaattcgatgcggccagcatggtggccgacgtctggctcaatggcgtcaagctcggc
cagcaccgaggtgcgttcacggccttccgtttcgatgtcacgtccggcctgaaagccggc
aagaacgtgctgctggtgaagaccgacaactcggccgcggccaacgatgcgagcccgacg
gcgatcgccccgctcggcggtgacttcaacgtggcgggcggcctgtaccgcaccgtgtcg
ctgatcgaaacaccgtccaccgcgcacatcgcgctggacgatctcggcagcagcggcgtg
ttcgccaagaccacctcgctgacgggcacgagcgccacggtgaacgtgctggccaagctg
aagaacgactcttccaccgacgggacctataccgtgacggcttcgctcgtcgaggccgac
gggaagaccttgaagaagtcgtcgaccgcacaggtgaccctgaaggctggacaaagcgca
ccgctggctcaggacatcaacgtcgaccagccgcacctctggcaaggcttgagcgatccc
tacctctaccacctggtcgtggagctgaaggattcgacaggggcggcggtcgaccgcgtg
gtgcagcgcttcggtgtgcgggagatgcgcttcgatgcgaaccagggcttcttcctgaac
ggcaagtcgatccctctgcatggcgtgaacatccaccaggacgaactgggcaaggcctgg
gcgatcaccaacgaggatatcgaccagaccttcgccttcatcaaggaagtgggggccaac
acggtgcggatggcgcactacccccattccgactacaccgtgcagcaggccgacaagctc
ggtgtcgtcgtatgggccgagttgccgctggtgaatgccacgtcgaaggcgagcctggtc
gatcccgaaaccaccgggttcgcggagaacgcgcgcgtgcaactccaggaactgatccgg
cagaagttcaacaatgcgtcgatcggcctgtggtccatcgccaatgaagtcaccggcggc
aacgatgcacgcaacaacgtccaacccctgttgaagagcctgaaccaggtggccaagtcc
gaggatccgacccgcgcgaccaccctggccaaccaggtcacccgcaatggcgacgtcgtg
ctgcccgatacgctgacgcagaccggctacaccgatacctacggtgtcaaccgctacttc
cagtggtactacggcacctcggagacgcagctcggcgaaaacctggatgcgctgcatgcg
caaatcccgacacagccgatcggcgtgagcgagtacggtgccggcaacgccatcacgcac
cacaccgacaacgtgttcggcggccgggtctgctcgagggacaccagcggcttcacccgc
atctgctaccaaccggaaggttatgcgaactacgtgcacgaaaaggcgtacaacgagatc
gtcaagcggccttatctgatgggcacctggatctggaacatgttcgatttcggctcgggc
aaccggcacgagggcgacatcggccagaccaataccaagggcattgtcacattcggaaga
gacgtcaagaaggacgtcttctacttctacaaggccaactggacacagacgccggtgacc
tacatcaccagccgccgctacacccaacgcgcttatccggtcaccgacatcaaggtctac
agcaacgcgagttcgatcacgctgcaggtcaatggccaggcggtgggcagcaaggccgcg
gcggactgcccgctcaaggtgtgcgagttcaagaacgtggcgctccaggccggcaacaac
agcgtggtcgtcaacggtacccacggctcggaaaccgtcaccgacgcagtgagctggaac
ctggcgcaggagaacgcgaccaacttcttcatcgccgccggcggcttgaccaccggtttc
ctctccaacgacccgctgctcggccaacaccgctacggttcggacaacttcttcgtcggt
ggcgaactgccgccgatcacggggcgttcgagcgtcggcctgacaggggccgtggcgatc
aatgggctcggcaccaccaccattccggaaaccggccgggtctgggacatgtggcgcgag
ggcaatgcgttcagctacaaccttccgctcgccaacggctcctacatggtcaccctgggt
ttcctcgagcccaccgccacggccaatggcgcacgcgtgttcaacgtgaatgcaaacggt
gccaatcaaattgccaacctcgatgtgctgcaggccgccggcgcgcgcaacacggccatc
gtgcggaagttcccggtgacggtgagcaacggccggctgttgctcgacttccagggcgtc
accggcaaggcgatcgtctccaacatcgcggtcgtcaagcagtag
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