Rathayibacter iranicus: C7V51_07560
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Entry
C7V51_07560 CDS
T05878
Symbol
kgd
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
ria
Rathayibacter iranicus
Pathway
ria00020
Citrate cycle (TCA cycle)
ria00630
Glyoxylate and dicarboxylate metabolism
ria00785
Lipoic acid metabolism
ria01100
Metabolic pathways
ria01110
Biosynthesis of secondary metabolites
ria01120
Microbial metabolism in diverse environments
ria01200
Carbon metabolism
ria01210
2-Oxocarboxylic acid metabolism
Module
ria_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ria_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ria00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
C7V51_07560 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
C7V51_07560 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
C7V51_07560 (kgd)
Enzymes [BR:
ria01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
C7V51_07560 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
C7V51_07560 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
C7V51_07560 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
C7V51_07560 (kgd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
SHOCT
Motif
Other DBs
NCBI-ProteinID:
AZZ55748
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All DBs
Position
1630743..1634585
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AA seq
1280 aa
AA seq
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MTSSSAVAGAGGLRRARPDDRGRINGESGRSAVSSQLTGVGTDQGAEDFGANEWLVEELY
EQYSTDRASVDESWWPILERYGAQLARTGSKAADDAQPAQASAAERVSTSAGGAVNHPVT
APSETAPAARTTSKQPKAQPIPADAPVGKPSTDDSTPNEDVVTPLRGMAKSLATNMDASL
TIPTATSVRTIPAKLMIDNRIVINNHLRRTRGGKVSFTHLIGWALIRALKDFPSQNVFYD
EVDGKPAVVAPAHVNLGIAIDMPKPDGTRALLVPSIKRADTLTFTAYLSAYEDLVKRARG
NKLVAGDFAGTTLSLTNPGGIGTVHSVPRLMKGQGCIIGAGALEYPAEFQGSSEKTLVEL
GIGKTITLTSTYDHRVIQGAGSGEFLKIVHELLLGGRDFYEDIFAALRIPYDPIHWSTDI
AVDLAERVSKTARVQELINSFRVRGHLMADVDPLEYVQRSHPDLAIESHGLTFWDLDREF
VTDGFGGKRQLKLRDILGILRDSYCRTVGIEYMHIQDPEQRAWVQQKLERGYEKPGHDEQ
LRILGKLNQAEAFETFLQTKYVGQKRFSLEGGESLIALLDAILQGAADENLDEVAIGMAH
RGRLNVLTNIAGKTYGQIFREFEGTQDPRTVQGSGDVKYHLGTEGTFRGAGGEEIPVYLA
ANPSHLEAVNGVLEGIVRAKQDRKPIGTFTTLPILVHGDAAMAGQGVVVETLQMSQLRAY
RTGGTIHVNINNQVGFTTPPHEARTSIYSTDGAKTIQAPIFHVNGDDPEAVVHVAQIAFE
YRQRFHRDVVIDLICYRRRGHNEGDDPSMTQPLMYSLIEAKRSVRKLYTEALVGRGDITE
EEYDRAHQDFQDRLERAFAETHAAQTGAIPVISDDGSIADLELPDAQRGEDYPGEPDVTG
VKTEVITRIGDAFMTPPEGFAVHPKLQQLLAKRQEMSRSGSIDWAFGELLALGSLLLENT
PVRLVGQDTRRGTFVQRHAVLHDRENGQEWLPLMNLSEQQARLWIYDSLLSEYAAMAFEY
GYSVERPDSLVLWEAQFGDFANGAQIVIDEFISSAEQKWGQRSSLVLLLPHGYEGQGPDH
SSARIERYLQMCAERNMTVARPSTPASYFHLLRRQAYSRPRRPLIVFTPKAMLRLRGASS
PVEDFTSGRFEPVIDDARVQDASAVKRVLLHAGKVHYDLKAELDKKPDDGIALVRVEQYY
PAPMEELRGIAERYPDAELVWVQDEPENQGAWPFIALDVAPTLGRPIRVVSRPSAASPAA
GSAKRHASEQADLLSRALTR
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctcgtccgcggtggcaggcgccggggggctgcggcgggcccgtccggatgat
cgaggacgaatcaacggagagagtgggcgatcggctgtgtcgagccagttgaccggagtg
ggaacagaccagggcgcggaggacttcggagccaacgagtggctcgtggaggagctgtac
gagcagtacagcaccgatcgcgcctccgtggacgagtcctggtggccgatcttggagcgc
tacggagcccagctcgcgcgcaccggctcgaaggcggcggatgatgcacagcctgcgcag
gcgtctgccgccgagcgcgtctcgacgagcgccggaggcgcggtgaaccatcctgtcacc
gccccgtccgagactgcacccgctgcgcgcacgacatcgaagcagccgaaggcccagccg
atccccgccgacgcaccagtaggcaagccctcgaccgacgactccacccctaacgaggac
gtcgtcactccgctgcgcggcatggcaaagagcctcgccaccaacatggacgccagcctc
acaatcccgaccgccacaagcgtgcgcaccatcccggcgaagctgatgatcgacaaccgc
atcgtcatcaataaccacctgcgccgcacacgcggcggcaaggtgtcgttcacgcacctg
atcggctgggcgctgatccgtgcgctgaaggacttcccgagccagaacgtcttctacgac
gaggtcgacggcaagcccgccgtcgtcgcgccggcgcacgtgaacctcggcatcgcaatc
gacatgccgaagcccgatggcacccgagccctgctcgtcccgagcatcaagcgcgccgac
accctgaccttcacggcctacctgtccgcctacgaagacctggtgaagcgggcccgcggc
aacaagctcgtggccggcgacttcgcgggtaccacactgtccctgacgaatcctggcggc
atcggcaccgtccactccgtgccccgtctgatgaagggtcagggctgcatcatcggcgcc
ggtgccctcgagtacccggccgagttccagggttcctccgagaagacgctggtcgaactc
ggcatcggcaagacgatcaccctcacctcgacctacgaccaccgcgtcatccagggagcg
ggctcgggcgagttcctgaagatcgtgcacgaactcctgctcggcggtcgcgacttctac
gaggacatcttcgccgcgctgcgaattccctacgaccccatccactggtcgaccgatatc
gccgtcgacctcgccgagcgcgtctccaagaccgctcgagtgcaagaactgatcaactcg
ttccgcgtgcgcggccacctgatggccgacgtcgatccgctcgagtatgtgcagcgctcg
cacccggacctcgcgatcgaaagccacggcctgacgttctgggatctcgatcgcgagttc
gtcaccgacggcttcggcggcaaacgccagctcaagctgcgcgacattctcggaatcctc
cgcgactcctactgccgcactgttggcatcgagtacatgcacatccaagacccggagcag
cgcgcgtgggtgcagcagaagcttgagcgcggttacgagaagcccggccacgacgagcag
ctgcgcatcctcggcaagctcaatcaggcggaagccttcgagacgttcctgcagacgaaa
tacgtcggtcagaagcgcttctcccttgagggtggggagtcgctgatcgcactcctcgac
gccatcctgcagggcgcggccgacgagaaccttgacgaggtcgcgatcggtatggcgcac
cgcgggcgcctcaacgtgctgaccaacatcgccggcaaaacctacggtcagatcttccgc
gagttcgagggcacccaggatccgcgcacggtccagggctccggcgacgtgaagtaccac
ctcggcacggagggcaccttccgcggtgccggtggtgaagagatcccggtgtatctcgct
gcgaacccctcgcacctcgaagcggtaaatggagtgctggagggcatcgtccgcgccaag
caggaccgcaagccgatcggcacgttcacgacgctgccgatcctcgtgcacggcgatgct
gcaatggcgggccagggcgtggtcgtcgagaccttgcagatgtcgcagctgcgcgcctac
cgcaccggcgggacgatccacgtcaacatcaacaatcaggtcggcttcacgaccccgcca
cacgaggcacgcacctcgatttactcgacggacggcgcgaagaccattcaggcgccgatc
ttccacgtcaatggagacgatcccgaagccgtcgttcacgtcgcccagatcgcgttcgag
taccggcagcgcttccaccgcgacgtcgtcatcgacctcatctgctaccgccgccgcggg
cacaacgagggagacgatccctcgatgacgcagccgctgatgtacagcctcatcgaggcg
aagcgctcggtacgcaagctgtacaccgaggctctcgtcggtcgcggcgacatcaccgag
gaggagtacgaccgcgcccaccaagacttccaggaccgcctcgagcgtgccttcgccgaa
actcacgcggcgcagaccggcgcgatcccagtgatctccgacgacggttcgatcgccgat
ctcgagctgcccgatgcgcagcggggcgaggactacccgggcgagcccgacgtgaccgga
gtgaagaccgaggtgatcacccgcatcggtgacgcgttcatgactccgcccgagggcttt
gcggtgcatccgaaactccagcagctcctcgcgaagcgccaggagatgagccggtccggc
tcgatcgactgggcgttcggcgagcttctcgcgctcggctcgctcctgctggagaacact
ccggtccgccttgtcgggcaggacacccgtcgcggcaccttcgtccaacgccatgccgtg
ctgcacgaccgcgagaacggccaggagtggctgccgctaatgaacctgtcggagcagcag
gcaaggctctggatctatgactccctgctctccgagtacgccgcgatggcgttcgagtac
ggctactccgtcgagcgtcccgactcgctggtgctgtgggaggcgcagttcggcgacttc
gcgaatggcgcgcagatcgtgatcgacgagttcatctcgtcggccgagcaaaagtggggc
cagcgctcatcgctcgtgctcttgctcccccacggctacgagggccagggcccggaccac
tcctccgcccggatcgagcgctacctgcagatgtgcgccgagcggaacatgaccgtcgcg
cgcccatcgacgccggcgtcctacttccatctactgcgccgccaggcgtactcgcggccg
cggcgaccactcatcgtcttcaccccgaaggcgatgctccgcctgcgcggtgcgtcgagc
cccgtcgaggacttcacctcgggacgcttcgagcccgtgatcgacgacgcccgcgtccag
gatgcgtcggccgtgaagcgcgtcctgctgcacgcaggcaaggtgcactacgacctcaag
gcggaactcgacaagaagcccgacgacggtatcgcgctcgtccgggttgagcagtactac
ccggcaccgatggaggagctgcgcggcattgccgagcgctacccagacgccgagctggtt
tgggtacaggacgagcccgagaaccagggggcgtggccgtttatcgctctcgacgtagcg
ccgacgctcggtcgcccgatccgcgtggtctcgcgcccctcggcagcctctcccgcggca
ggctctgccaagcgtcacgcctccgaacaggccgacctgctgtcacgagcgctcactcgc
tga
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