KEGG   Roseovarius indicus: RIdsm_05178
Entry
RIdsm_05178       CDS       T06222                                 
Symbol
alkB
Name
(GenBank) Alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
rid  Roseovarius indicus
Brite
KEGG Orthology (KO) [BR:rid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rid03400]
    RIdsm_05178 (alkB)
Enzymes [BR:rid01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     RIdsm_05178 (alkB)
DNA repair and recombination proteins [BR:rid03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    RIdsm_05178 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: QEW29334
UniProt: A0A0T5PE34
LinkDB
Position
complement(5321494..5322099)
AA seq 201 aa
MQPTQTIRGVDVYEGFLDREAQGQVVDDIRGVAEIAPLFSPMTPYGKPMRVKMTSAGKYG
WYSDRKGYRYERQHPDGQDWPAIPESVLAIWRTLVSTERMPDCCLVNYYGEEARMGMHQD
RDEADFGWPVLSVSLGDEGMFRIGNATRGGKTQSVWLRSGDVVVMGGEARLLYHGLDKIR
FGTSTLLPKGGRINLTLRVVD
NT seq 606 nt   +upstreamnt  +downstreamnt
atgcaaccgacacagacgatcaggggcgtagacgtgtacgagggattcctcgaccgcgag
gcgcaggggcaggtggtggacgatatccgcggcgtggccgaaattgcgccgctgttctcg
ccgatgacaccctatggcaaaccgatgcgggtgaagatgacgtcggctgggaaatacggg
tggtattcggatcggaaagggtatcggtatgagcggcagcaccccgacgggcaggactgg
cccgcgataccggagagcgttctggcgatctggcgcacactggtgagcacggagcggatg
ccggattgctgccttgtgaactattatggcgaagaggcccggatggggatgcaccaggac
cgcgacgaggccgatttcggctggccggtgctgtcggtgtcgctgggcgacgaggggatg
ttccggatcggtaacgccacgcggggcggcaagacgcaatcggtgtggctgcggtcgggt
gacgtggtggtgatggggggcgaggcgaggctgctctatcatgggctcgacaagatccga
tttggcacgtcgacgctgttgccgaagggcgggcggatcaacctgacgctgcgggtcgtg
gattag

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