Rhizobium indigoferae: U5G49_000435
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Entry
U5G49_000435 CDS
T09660
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rif
Rhizobium indigoferae
Pathway
rif00521
Streptomycin biosynthesis
rif00523
Polyketide sugar unit biosynthesis
rif00541
O-Antigen nucleotide sugar biosynthesis
rif01100
Metabolic pathways
rif01110
Biosynthesis of secondary metabolites
rif01250
Biosynthesis of nucleotide sugars
Module
rif_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
U5G49_000435 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
U5G49_000435 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
U5G49_000435 (rfbC)
Enzymes [BR:
rif01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
U5G49_000435 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WQN35404
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All DBs
Position
complement(434239..434805)
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AA seq
188 aa
AA seq
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MYALNVEQLEIGDVKKITPARFGDSRGYFSEVFKDSWFRTSVADVSFVQDNESLSAQPGT
VRGLHFQLSPFAQGKLVRCLRGALLDVAVDIRHGSPTYGKWVSAELSPENGSQLWVPAGF
AHGFVTLQPDTIISYKVTAPYSAEHDRGVRWNDAEIGIEWPQMDAYVLSDKDNKQPLLSE
LPEYFQFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgttgaatgtagaacaactggagatcggggacgtcaaaaagatcactcccgcc
aggttcggtgactctaggggctatttcagcgaagtcttcaaggattcctggttccgcact
agtgtggccgacgtctctttcgtgcaggataatgagtccctttcagcacagccgggaacc
gtccggggattgcattttcagttgtctccctttgcgcaaggcaaacttgtgcgctgtctc
cgtggcgcgctcctggatgtggccgtcgatatcaggcatggctctccgacatatgggaag
tgggtctcggcagaactgtcccccgagaatggctcacaactttgggtgccagccggattt
gcacatgggttcgtaactttgcagcctgatacgatcataagctacaaagtcacagctccc
tacagcgcggagcatgaccgtggcgtgcggtggaacgacgccgagatcgggatcgagtgg
ccgcagatggatgcctacgttctttctgataaggacaataagcagccactgctttccgaa
ctccccgaatattttcaattttcgtaa
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