Rhizobium indigoferae: U5G49_003525
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Entry
U5G49_003525 CDS
T09660
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rif
Rhizobium indigoferae
Pathway
rif01501
beta-Lactam resistance
rif01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rif00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U5G49_003525
01503 Cationic antimicrobial peptide (CAMP) resistance
U5G49_003525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rif02000
]
U5G49_003525
01504 Antimicrobial resistance genes [BR:
rif01504
]
U5G49_003525
Transporters [BR:
rif02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
U5G49_003525
Antimicrobial resistance genes [BR:
rif01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U5G49_003525
BRITE hierarchy
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
WQN38362
LinkDB
All DBs
Position
3533283..3536393
Genome browser
AA seq
1036 aa
AA seq
DB search
MAKFFIRRPIFAWVIAITIMLAGLLAIFMLSISQYPDIAPTTVRINATYRGASAETVEKS
VTTIIEDGMTGLDDLTYMTSTSSTGSASIQLTFGTSADPDIAQVQVQNKLQLVQSQLPSD
VIDAGISVTRSTSSILLVGSLVSTDGKRNSVDLGNIMSTSIEDQIQRLEGVGSINVFGSG
YAMRVWLDPFKLLKYQLTPSDVTSAIQAQNTQVSVGSLGAQPTIPGQQINVTITAQSQLT
TVADFEHIILKVEKDGATVRLSDVSRIEIGQESYGGSSRYNGQPSTGFAVNLAIGANAID
TAARVRSALEVIGRGLPAGVEITYPYDTTPFVELSIEKVVHTLIEAIVLVFVVLLVFLQN
LRATLIPTIAVPVVLLGTFGVLAVTGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIMS
EEKLSPLEATEKSMGEITGAIVGIALVLTAVFIPMAFFGGSTGIIYRQFSITIVSAMLLS
ALVALVLTPALCATMLKPVGEHRKHRVGDWFNRNFTRSTNGYISAIGYLLKRPIRVMLVF
LLVGAGCAYLFTRLPSSFLPQEDQGVLLTIVTTPPGSTTQQTQAVVEKVEKYYRENEKDA
VDSVFGALGFGFSGSGQNSAIVFTKLKDFAQRTDPTLSAQSVVNRALRSFFAIREAQVFA
LLPPAIQGLGVSSGFSMYLVDTGGHGNDALTAASKRLIQMGNTSGKIVALRSSNKEVEPQ
MRIVLDQEKIGAMGVDIASVNSMLSIIFTGRDVNDFTLNGEIKPVYVEGDAPFRMQPSDL
NHWYARNNDGEMVPFSAFTRTEWVKGAPSLARFNAVSAIPLDGASAPGVSSGDAMNEMEA
LTNDLGGGYTVAWQGISYQERLSGSQAPMLYAISVLVVFLCLAALYESWSIPFSVIMAVP
VGILGALTAATLFGQANDVYFKVGLLTTIGLAAKNAILIVEFAKDRMESGMGLYEATLEA
ARLRLRPIIMTSLAFILGVVPLAIATGAGSAAQNAIGIGVLGGMLAATMLGIFFVPSFFV
VIRRIFATRGKNAAGL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtttttcatccgacgtccgattttcgcctgggtcattgcgatcaccatcatg
ctcgccggcctgctggcgatcttcatgctgtcgatctcgcaatatcccgacatcgccccg
acgacggttcgcatcaacgccacctatcgcggcgccagcgccgagactgtcgagaaatcg
gtgacgacgatcatcgaggatggcatgaccggcctcgacgatctcacttatatgacctcg
acctcatcgacgggttcggccagcatccagctcaccttcgggacgagcgccgaccccgat
atcgcccaggtgcaggtgcagaacaaactgcagttggttcagtcgcagcttccaagcgac
gtcatcgatgccggcatcagcgtcacccgctcgacctcgagcatccttctcgtcggctcg
cttgtttcgaccgacggcaaacgcaactcggtcgacctcggcaacatcatgtcgacctcg
atcgaggatcagatccagcgcctggaaggcgtcggcagcatcaatgtcttcggttcggga
tacgccatgcgcgtctggctcgatccgttcaagctcttgaaataccagttgacgccgagc
gacgtgacgtcagccatccaggcgcagaacacccaggtctccgttggctcgctcggtgcc
cagccgacgatccccggccagcagatcaacgtcaccatcaccgctcaaagccagctgacc
accgtcgccgatttcgagcacatcatcctgaaggtcgaaaaggacggcgcgacggtgcgc
ctgagcgacgtctcgcgcatcgagatcggtcaggaaagctacggcggtagttcgcggtac
aacggccagccatcgaccggttttgccgtcaaccttgcgatcggcgccaacgcaatagat
accgctgcccgtgtgcgctccgccctggaggtcatcggccgcggcctgccggcaggtgtg
gagatcacctatccctacgacaccacgccgttcgtggaactgtcgatcgagaaggtcgtg
cacacgctgatcgaggcgatcgtgctcgtcttcgtggtgctgctcgtcttcttgcagaat
ctccgtgcgacgctgatcccgacgattgccgttcccgtggtgctgctcggcaccttcggg
gtgctggcggtcaccggttactcgatcaataccttgacgatgttcgccatggtgctggcg
atcggtcttctcgtcgacgacgccatcgtcgtcgtcgaaaacgtcgaacgcatcatgtcc
gaagaaaagctctcgccgctcgaggcaacggaaaaatcgatgggcgagatcaccggcgcc
attgtcggcattgcgctcgtcctgactgccgtcttcattccgatggccttcttcggtggt
tcgaccggcatcatctatcgccagttctcgatcaccatcgtctcggccatgctgctgtcg
gcgctcgtcgccctcgtgctgacgcccgcactttgcgccacgatgctgaagccggtcggc
gaacacaggaagcaccgtgtcggcgactggttcaaccgcaacttcacgcgctcgaccaac
ggctatatcagcgccatcggctatctgctgaagcggccgatccgtgtcatgctggtcttc
ctcctggtcggcgccggctgcgcttatctcttcacccgcctgccgagctccttcctgccg
caggaagaccagggcgtgctgctgaccatcgtcaccacgccgccgggttcgaccacgcag
caaacccaggcggtcgtcgagaaggtcgagaaatattatcgtgaaaacgagaaggacgcc
gtcgattccgtcttcggcgcgctcggcttcggcttcagcggttccggccagaacagcgcc
atcgtcttcaccaaactgaaggatttcgcacagcgcaccgatccgacgctgagcgcccaa
tcggtcgtcaaccgtgcgctgcgcagcttctttgcgatccgcgaggcgcaggtcttcgcg
ctgctgccgccggcgatccaggggctaggtgtgtcgagcggcttctcgatgtatctcgtc
gataccggcggccacggcaacgacgccctgacggcagcctccaagcggctgatccagatg
ggcaacacgtcgggcaagatcgtggcgctgcgcagcagcaacaaggaagtcgagccgcag
atgcgcatcgtgctggatcaggagaagatcggcgccatgggcgtcgacatcgcctcggtc
aactcgatgttgtcgatcatcttcaccggccgcgacgtcaacgacttcacgctgaatggc
gagatcaagccggtctacgtcgagggcgatgcgcccttccgcatgcagccgagcgacctc
aaccactggtacgcccgcaacaatgacggcgaaatggtgcccttctccgcctttacccgc
acggagtgggtgaagggcgcgccctcgcttgcccgctttaatgccgtcagcgccatcccg
ctcgacggcgcgtccgctcccggagtttcctccggcgatgcgatgaacgaaatggaagcc
ctgaccaatgacctcggcggcggttatacggtcgcctggcagggcatatcctatcaggag
cgcctttccggttcgcaggcaccgatgctctatgcgatctcggttctcgtcgtcttcctc
tgcctggctgcgctttacgaaagctggtcgatccctttctcggtgatcatggcggtgccc
gtcggtattctcggggcactgacggcggcaaccctcttcggccaggcgaacgacgtctat
ttcaaggtcggcctgctcaccactatcgggctggcggcgaagaatgcgatcttgatcgtc
gaattcgccaaggatcgtatggaaagcggcatggggctctacgaggcgacattggaagcc
gcgagattacgcctgcggccgatcatcatgacttcgcttgcctttattctgggcgtcgtg
ccgctggcgatcgcgacaggcgcgggctcggcggcgcaaaacgccataggcattggcgtt
ctcggcggcatgctggcggcgacgatgctcggaattttcttcgtgccgtcgtttttcgtc
gtcattcgacgcatctttgccacacgcggcaaaaatgcggcaggactgtga
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