Roseburia intestinalis M50/1: ROI_23970
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Entry
ROI_23970 CDS
T02598
Name
(GenBank) ABC-type sugar transport system, periplasmic component
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_23970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_23970
Transporters [BR:
rim02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
ROI_23970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
CBL09369
UniProt:
D4KR67
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All DBs
Position
complement(2408477..2410075)
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AA seq
532 aa
AA seq
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MKKKVVSVLMAAAMVAGMAGCGSSNTGNAGTTNSNASTNNEATTESGDASASTATDSDVE
KPEEITIMVDGTVFTQENGQAEFIAKLEDLLGMKINVIQPDHDAYYDVVGQTVASGDWPD
VMILSSTYYAGYAEQGVLWDMTDAYASSDLKTRQDAYGSTGVIDGVRLDGKLYGMPAARG
NGCVTYVKKAWLDNCGLDVPTNYDEYLAMLEAFTTGDPDGNGVNGDTYGVSAAGFIGTEA
PYTNYLPEFYQDANPSFYKAEDGTWKDGFTEDSMKSALERMAAAYKEGVIDPTTLTNGTS
DCRNKFYDDSFGVFTYWAGTWATNLKTNLEANGKDGELVALPPIAEVGQYLDRVPPVWCI
TSACENPEGVFKYFIEPMQDGGDVQFLWTYGVEGIHWSTAEETLFAGTENEKTYADGEFH
MLENREKEGTQYTKAHIDPMLALVELANDPQEESVAAEAKESAQLFNDNCKAADLVPTTD
EMSEYNGDLTTLKNELIAKVVMGEITVDDAYAQFESNHGAEWSQAIVDSLNK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaggtagtatcagtccttatggctgccgctatggtagctggtatggcagga
tgcggttccagcaatactggtaacgcaggaacaacaaattcaaatgcttctacaaataat
gaagcaaccacagagagcggtgatgcttccgcaagcacagcaaccgattctgatgttgag
aaaccagaagagatcaccattatggtagatggaactgttttcacacaggaaaacggacag
gcagagttcattgctaaattggaagatcttcttggaatgaagatcaatgtgatccagccg
gatcatgatgcttactatgatgtagtaggacagacagttgcaagtggtgactggccagac
gttatgatcttatcttctacctattatgcaggttatgcagagcagggagttctgtgggat
atgacagacgcttatgcatcttctgatttaaaaacaagacaggatgcatacggcagcaca
ggagttatcgatggtgtaagacttgatggtaagttatacggtatgccggcagctcgtggt
aacggatgtgttacatatgttaagaaagcatggttagacaactgcggacttgatgttccg
acaaactatgatgagtatcttgcaatgctcgaagcatttacaaccggtgacccggatgga
aatggtgtaaacggagatacctacggtgtatctgctgctggtttcatcggaacagaggct
ccatatacaaactacttaccagagttctatcaggatgcaaacccaagcttctataaagca
gaagacggaacatggaaagatggattcacagaggattctatgaagagcgcacttgagaga
atggcagctgcttacaaagagggcgtgattgatcctaccacattaacaaatggtacatct
gactgccgtaacaaattctatgatgacagctttggtgtatttacttactgggcaggtaca
tgggcaaccaacttaaagacaaaccttgaagcaaacggtaaagacggtgagttagtagca
ttacctccgatcgctgaagtaggtcagtaccttgaccgtgttccaccagtatggtgcatc
acatctgcatgcgagaacccggaaggcgtattcaaatacttcatcgagccgatgcaggat
ggcggagacgttcagttcttatggacatacggtgtagaaggcattcactggtcaacagca
gaagagacattatttgctggaacagagaacgagaaaacatatgctgatggtgagttccat
atgttagagaaccgtgagaaagagggtacacagtacaccaaagctcacattgatccaatg
cttgctttagttgagcttgctaacgatcctcaggaagagtccgtagcagcagaagcaaaa
gagtcggcacagttattcaatgataactgcaaagctgctgatcttgttcctaccacagat
gagatgagcgagtacaatggtgatttaacaacgttaaagaacgagctgatcgcaaaagtt
gttatgggtgagatcactgttgatgatgcatatgcacagtttgagtcaaatcacggtgca
gagtggtcacaggcaatcgttgattctttaaacaaataa
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