Roseburia intestinalis M50/1: ROI_25230
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Entry
ROI_25230 CDS
T02598
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease components
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_25230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_25230
Transporters [BR:
rim02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
ROI_25230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_30
AI-2E_transport
AAA_21
TsaE
AAA_14
AAA
AAA_24
EI24
AAA_18
DUF5906
DO-GTPase2
DUF87
AAA_16
DEAD
Zeta_toxin
AAA_15
IstB_IS21
AAA_23
AAA_7
nSTAND3
AAA_29
ATP_bind_1
AAA_28
zf-C2H2_jaz
SMC_N
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CBL09484
UniProt:
D4KRI2
LinkDB
All DBs
Position
complement(2543501..2545354)
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AA seq
617 aa
AA seq
DB search
MSNEREKVRMQHRGRGPMGRGMQPGEKPKDLKGSLGKLLSYIGNFKAAIIVVMIFAAAST
VFNVIGPKTLGKATTALSEGLMAKIQGTGSIDFTYIGQILLFVLGLYVCSAAFNFIQGWI
MTGVTQKICYRMRKEISGKINRMPMKYFESRTYGEVLSRITNDVDTLGQGLNQSITTIIT
SVATLVGVLIMMLSISPLMTLIAIVILPISMALISFVVKKSQKYFKDQQEYLGHINGQVE
EVYGGHLVIKAFNREKDTIEEFNRTNEILYQSAWKSQFLSGMMQPIMMFVGNLGYAAVAL
SGGLLAIRGTITIGDIQAFIQYVKNFTQPIQQIAQVINQVQSMAAASERVFEFLNEEEED
QTVEHPADVSAVTGTVDFDHVQFGYNPDQTIIKDFSAHVKPGQKIAIVGPTGAGKTTMVK
LLMRFYDVNSGSIKLDGHDVRDFNRRELRDAFGMVLQDTWLFKGTIMENIRYGRLEATDE
EVIAAAKAAHADHFIKTLPGGYQMELNEDASNVSQGQKQLLTIARAILADNKILILDEAT
SSVDTRTEVTIQKAMDNLMRGRTSFVIAHRLSTIRNADLILVMKDGDIVEQGNHEELLEK
NGFYANLYNSQFEDVVA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgaaagagaaaaagttagaatgcagcaccgtggcagaggaccgatggggcgc
ggcatgcagccgggagaaaaaccgaaggatttaaagggttctctgggaaaactgttatct
tacattggaaattttaaagctgcaattattgtagtcatgatttttgcggcggcttccacg
gtatttaatgtaatcgggcctaagactttaggaaaggcaaccacagcgctctccgaagga
ctgatggcaaagatccagggcacgggaagcatcgattttacctatatcggacagatcctt
ttatttgtgttagggctttatgtgtgcagtgcggcatttaactttattcagggctggatt
atgaccggtgtaacgcagaagatctgctaccgcatgcgtaaagaaatctccgggaaaatc
aaccgcatgccgatgaagtattttgagagccgtacttacggagaagttttatcgagaatc
accaatgatgtcgataccttaggacagggattaaaccagagtatcacaacgatcatcacg
tcggttgcaaccttagtcggggtgctgatcatgatgttaagtatctccccgttaatgacg
ctgattgcaatcgtgatcctgccgatctccatggcactgatctcatttgtggtcaaaaaa
tcccagaaatacttcaaagaccagcaggaatatttaggtcatatcaatggacaggtcgag
gaggtttatggcgggcatttagtcatcaaggcattcaaccgtgagaaagacacgattgag
gaatttaaccgcaccaatgagattttatatcagtctgcatggaaatcacagtttttgtca
ggtatgatgcagccgatcatgatgtttgtcggaaatctcggttacgcagcagtggcttta
tccggtggactgcttgcaatccgtggaacgatcacgatcggtgatatccaggcatttatc
cagtatgtaaaaaacttcacacagccgatccagcagattgcacaggtcatcaatcaggta
cagtcgatggcggcagcatctgagcgtgtgtttgagtttttaaatgaggaagaggaagat
cagaccgtagaacatccggcagatgtgagtgccgtaaccggaaccgtcgattttgatcat
gtacagtttggttacaacccggatcagacgatcatcaaagatttcagtgcacatgtcaaa
ccggggcagaagattgcaatcgttgggccgaccggcgcaggaaagactacgatggtaaag
cttctgatgcgtttttatgatgtaaacagcggttccatcaaattagacggtcatgatgtc
agggattttaaccgcagggaattaagagatgcgtttggaatggtattgcaggatacctgg
ctgtttaagggaacgatcatggaaaatatccgttacggacgtttagaagctacagatgaa
gaggtcattgcagcggcgaaagcggcacatgctgaccacttcattaagacacttccgggt
ggttaccagatggaattaaatgaggatgcaagcaatgtttcacagggacagaagcagctc
cttacgatcgcaagggcaatccttgcggacaataagattttgatcctcgatgaggcaaca
tcttcggttgatacgagaaccgaggtcacaatccagaaagcgatggataatctgatgcgt
ggcagaaccagttttgtcattgcacacagactctcaacgatccgcaatgcggatctgatc
cttgtcatgaaggacggggatatcgtggagcagggaaatcacgaagaactgcttgaaaaa
aatggattttatgcaaatctttataattcacagtttgaggatgttgttgcgtaa
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