Roseburia intestinalis M50/1: ROI_37820
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Entry
ROI_37820 CDS
T02598
Name
(GenBank) carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_37820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_37820
Transporters [BR:
rim02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
ROI_37820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
CBL10557
UniProt:
D4KJM7
LinkDB
All DBs
Position
3787841..3789562
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AA seq
573 aa
AA seq
DB search
MKRRKAVSVLLVMAMAASMLTGCGGGNTNTTGTNGAASTEGGSSGENTNDSSGVKEFTAF
FAVPGTEINDDNEIEQKIAEITGAKCKETWLTGQTAQEAVGTLIAGGEYPDMIDGGDGMK
QLYDAGALVALDDYIDKYPNIKEFFTDEEWDKLRQDDGHIYWINQFGNIYGEEKATTHGD
EAFWIQTRVLKWADYPEIHTMDQYFDLIEKYNEANPTMDDGTENIPYTILCDDWRYFCLE
NAPQFLDGYPNDGSCIVDPDELKIVDYNTTPTAKRYFQKLNEEYQKGIVDPESFTQTYDE
YIAKLSTGRVLGMIDQWWDFAYNVNDAFKQQGLDKEGCNYVPLPITIDEGMKNQWHNSGG
TLNVSSGLAITTSCEDVEGALQFINDLLDQEVHDLRFWGEKGVDYDVDENGEYYRTEDMR
MQSSDTAYKASHSCSYSYFPQYSGTSRDGINAMKSGDQAKEFYDGLSEDVQNCFKAYGAE
TYVDMLGTSEAPGPWYPMYSYSNNMTTATEGGMAWTKMGEVKHEYLPKVVMASDFDSAWE
EYMGVYNNCNPQAFIDEMQAELDRRIEEAKKYQ
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaagaaaagcagtgtcagtattgcttgttatggcaatggcagcgtcaatgctt
accggatgtggcgggggaaataccaataccacaggaacaaatggcgcagcatccacagag
ggaggctcatcaggggaaaacacaaatgattcatccggcgtgaaagagtttaccgcattt
tttgcagtacctggtacagagatcaatgatgacaatgagatcgagcagaagatcgcagag
atcacaggtgcaaaatgcaaggagacatggctgaccggacagacagcacaggaggcagtc
ggaacactgatcgcaggcggtgagtatccggatatgatcgatggcggcgacggaatgaaa
cagctctatgatgcgggtgcgctggtagcactggatgattacatagacaaatatccaaac
atcaaagaattttttacagatgaggagtgggataaactccgtcaggatgatggacatatc
tactggatcaatcagtttggaaatatttacggggaagaaaaagcaaccacccacggtgac
gaggcattctggatccagacgagagtgttaaagtgggcagactatcctgagatccatacg
atggatcagtattttgacctgatcgagaaatacaatgaagcaaatccgaccatggatgac
ggaacagaaaatatcccgtacacgatcctctgcgatgactggagatacttctgtctggaa
aatgcaccacagtttttggatggctatccaaatgatggaagttgtatcgtagacccggat
gaattaaagatcgtagattacaatacaacaccgacagcaaaacgttacttccagaaatta
aatgaagagtaccagaaaggaatcgtagatccggagtcttttacacagacctatgatgag
tacattgcaaaattatcaaccggtcgtgtacttggaatgatcgatcagtggtgggatttt
gcatacaacgtaaatgatgcatttaagcagcagggacttgacaaggaaggctgcaattat
gtaccgcttccgatcacgatcgacgaaggtatgaagaaccagtggcacaactccggcgga
acattaaatgtgtcaagtggtcttgcaatcaccacaagctgcgaagacgtggagggcgcc
cttcagttcatcaatgatctgttagaccaggaagtacatgatcttcgtttctggggcgaa
aaaggtgtggattatgatgtggatgaaaatggtgagtattatcgtaccgaggatatgaga
atgcagtcctccgacaccgcttacaaggcatcccacagctgttcatattcttatttccca
cagtattccggtaccagccgtgacggcattaatgcaatgaaatcgggggatcaggcaaaa
gagttctatgacggattgagcgaggacgtacagaactgctttaaagcatatggcgcagag
acttatgtggatatgcttggaaccagcgaggcaccgggaccgtggtatccgatgtattcc
tattcaaacaacatgacgactgcaactgagggcggcatggcatggacaaagatgggcgaa
gtaaaacatgaataccttccgaaggtcgttatggcatctgactttgacagtgcatgggaa
gagtacatgggtgtctacaataactgtaatccgcaggcatttattgatgagatgcaggca
gaattagaccgcagaattgaggaagcaaaaaaatatcagtaa
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