Agrobacterium pusense IRBG74: BN877_I1098
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Entry
BN877_I1098 CDS
T02867
Name
(GenBank) putative DNA polymerase III, chi subunit, HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir03030
DNA replication
rir03430
Mismatch repair
rir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN877_I1098
03430 Mismatch repair
BN877_I1098
03440 Homologous recombination
BN877_I1098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rir03032
]
BN877_I1098
03400 DNA repair and recombination proteins [BR:
rir03400
]
BN877_I1098
Enzymes [BR:
rir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN877_I1098
DNA replication proteins [BR:
rir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN877_I1098
DNA repair and recombination proteins [BR:
rir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN877_I1098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
DUF6164
Motif
Other DBs
NCBI-ProteinID:
CDI08008
UniProt:
A0A1L9CHG8
LinkDB
All DBs
Position
1077378..1077827
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AA seq
149 aa
AA seq
DB search
MTEILFYHLTESKLEDALPPLLEKSLERGWKVAVQTVGEERRDFLDTHLWTFRDDSFLPH
ATDTSPVPQNQPILLTASDGNANAASVRFLVDGAEPPAVEAYERIVFMFDGYDAYQTEMA
RNHWKRLKTEGHSLTYWQQSPEGRWQKKA
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaattctgttctatcacctgacggaatcgaagctggaggacgcgctgccgccc
ttgctcgagaaatcgctggaacgcggctggaaggtcgcggtccagacagtgggcgaggag
cgccgggacttcctcgacacgcatctctggacgttccgcgacgacagcttccttccgcac
gccaccgacacttcgccagtaccgcaaaaccagccgattctcctgacggcatcggacggg
aacgccaacgccgcgagtgttcgttttctcgtcgatggcgccgagcccccggcagtggag
gcttatgaacgcatcgtcttcatgttcgacggatacgatgcctaccaaaccgaaatggcg
cgaaaccactggaaaaggctgaaaacggaggggcattcgctgacctactggcagcaatcg
ccggaagggcgctggcagaaaaaggcatga
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