Agrobacterium pusense IRBG74: BN877_II1695
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Entry
BN877_II1695 CDS
T02867
Symbol
rfbC
Name
(GenBank) dTDP-4,deoxyrhamnose 3,5 epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00521
Streptomycin biosynthesis
rir00523
Polyketide sugar unit biosynthesis
rir00541
O-Antigen nucleotide sugar biosynthesis
rir01100
Metabolic pathways
rir01110
Biosynthesis of secondary metabolites
rir01250
Biosynthesis of nucleotide sugars
Module
rir_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BN877_II1695 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BN877_II1695 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BN877_II1695 (rfbC)
Enzymes [BR:
rir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
BN877_II1695 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CDI11480
UniProt:
U4Q2C9
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All DBs
Position
linear:complement(1789948..1790517)
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AA seq
189 aa
AA seq
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MQLEAFTIPDLKKITPARFGDNRGYFSEVFKRDWFRDKVADVEFVQDNESLSAQAGTVRG
LHFQTEPFAQGKLVRCIRGRLLDVAVDIRKGSPTFGQWAAVELSPENGEQLWVPAGFAHG
FMTLVDDTVISYKVTAQYSAANDRGVKWDDPAIGINWPELDGIVLSDKDAKQPLLSDLPE
YFTYQTTGN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgcaactagaagcattcacgataccagacttgaaaaagataactccggctcgtttcggc
gacaacaggggttatttcagtgaggttttcaagcgggattggtttcgcgacaaagtagcg
gatgtagagttcgtgcaggacaatgaatccctttcggcacaggccggaaccgtgcgaggg
ctccatttccagacagagccttttgcacagggcaagctcgttcgctgtattcgtggccgg
ctgctggatgttgcggtggatataagaaaaggatcacccaccttcgggcaatgggccgct
gtcgagctctcacctgaaaatggcgagcaactttgggtgccagcgggatttgcacacggt
tttatgacgctcgttgacgacacggtcatctcatacaaggtgacggctcaatacagcgca
gctaatgaccgcggcgtaaaatgggacgaccccgccatcggcataaattggcctgaactg
gacggcatcgtcctttcagataaggatgcgaagcaaccgcttctgtcagatctgcctgaa
tatttcacttaccaaaccactgggaactga
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