Rahnella inusitata: I2123_00290
Help
Entry
I2123_00290 CDS
T09790
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
riu
Rahnella inusitata
Pathway
riu00730
Thiamine metabolism
riu01100
Metabolic pathways
riu01240
Biosynthesis of cofactors
Module
riu_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
I2123_00290 (thiC)
Enzymes [BR:
riu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
I2123_00290 (thiC)
BRITE hierarchy
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QUT17282
LinkDB
All DBs
Position
65585..67465
Genome browser
AA seq
626 aa
AA seq
DB search
MDSLQGEAFPNSRRIYLQGERTDIRVPMREIQLSPTLVGGGKDTPQYEENEAIPVYETAG
PYGDPEASIDVHAGLAKCRASWIAERADTEELPQVSSGFTQQRLADEGLDHLRFELLPRP
RKAKAGKNVTQLHYARQGIITPEMEFIAIRENMGRERIRGEVLRQQHPGESFGAHLPANI
TAEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVW
STRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGVAEDLNWEMFRDT
LLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHRESFLYENFRE
ICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHV
PMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTP
KEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALD
PATARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRDYAAALEAKAQPVEIVESGM
AQMSAEFRSRGSELYHPADLSTEVGK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atcgacagtctgcagggcgaagcatttcccaactcccgccgaatctatctgcaaggcgag
cgcacagatatccgcgttcccatgcgtgaaatccagctcagcccgacactggtcggcggc
ggcaaagacaccccgcaatatgaagaaaacgaagcgattccggtgtatgaaacagccgga
ccttacggtgaccctgaagcctctattgacgtccatgccggtctggcaaaatgccgcgcc
agctggatagctgaacgggcagacaccgaagaacttccgcaggtcagctccggttttacc
cagcaacgtctggccgacgaaggtttagatcatttgcgcttcgaacttctgccgcgcccg
cgtaaagcgaaagcgggaaaaaacgtcacgcaactgcactacgcgcgccaggggataatt
acgccagaaatggagttcatcgccatccgcgaaaatatgggacgcgaacggatccggggt
gaagttctgcgccagcaacatccgggtgaaagtttcggcgcgcatctgcccgccaatatc
acggctgaattcgtacgtcaggaagtcgccgccggtcgcgccattatcccggccaatatc
aaccatccggaatcggagccaatgattatcgggcgaaactttctggtgaaagtgaacgcc
aatatcggcaattcagcggtaacgtcgtccatcgaagaagaagtcgagaagctggtctgg
tcaacgcgctggggggcggacacggtgatggatctctccaccggccgctatatccacgaa
acccgcgaatggatcctgcgtaacagcccggtgcccatcggcacggtgccaatttatcag
gcgctggagaaagtaaacggcgtcgcagaagatctgaactgggaaatgttccgcgatacg
ctgctggaacaggccgagcagggcgtcgattacttcactattcacgccggtgtgttgctg
cgctatgtgccgatgaccgccaaacgtctgaccggtatcgtctctcgcggcggatcgatc
atggccaaatggtgtctttcgcatcatcgtgaaagtttcctctacgagaatttccgcgag
atttgtgaaatctgcgcagcttacgatgtttcactctcgctgggtgacggcctgcggcct
ggctcgattcaggacgccaacgacgaagcacaatttgcagagctgcacacgctgggcgaa
ctgaccaaaatcgcgtgggaatatgatgtgcaggtgatgatcgaagggccggggcatgtg
ccgatgcagatgatccgccgcaacatgaccgaagaactcgagcattgccacgaagcgccg
ttttacacgctggggccgctgaccaccgacattgcaccgggttatgaccatttcacttca
gggatcggagccgccatgatcggctggttcggctgcgccatgctgtgttacgtcacgccg
aaagagcatctcggcctgccgaacaaggaagacgtcaaacaggggctaatcacctataaa
attgcggcgcacgcggcggatttagcgaaagggcatcccggcgcgcaaatccgcgacaac
gccatgtcgaaagcgcgtttcgaattccgctgggaagaccagttcaatctggcactcgat
ccggccactgcccgcgcttatcacgatgagaccctgccgcaggaatccggcaaagtcgca
cacttctgttcaatgtgtggaccaaaattctgctcaatgaaaatcactcaggaagtccgc
gattacgccgccgcgctggaggccaaagcccagccggttgaaatcgtagaatccggcatg
gctcaaatgtctgccgaattccgctcgcggggcagcgagctttatcatccggcagatctg
agcacggaggtggggaaatga
DBGET
integrated database retrieval system
