Roseburia intestinalis XB6B4: RO1_13720
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Entry
RO1_13720 CDS
T02597
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
rix
Roseburia intestinalis XB6B4
Pathway
rix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RO1_13720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rix03400
]
RO1_13720
Enzymes [BR:
rix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RO1_13720
DNA repair and recombination proteins [BR:
rix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RO1_13720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecG_wedge
RecG_dom3_C
ResIII
SecA_DEAD
tRNA_anti-codon
SLFN-g3_helicase
IMS_HHH
AAA_30
Lipoprotein_20
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CBL12000
UniProt:
D4KXB0
LinkDB
All DBs
Position
1384021..1386078
Genome browser
AA seq
685 aa
AA seq
DB search
MDRNSPLREIKGVGAKTEELFHKIGVYTVGDILLHYPRTYIQYPQAKHVDEVLDGEQAAV
LGRITRTPVVRKVRTMQITVTTISEMGASLELVWYRMPYMKNNLKVGSTYIFYGKVNKKN
GRLVMEQAAMFTEEQYASMEQVFLPVYTLTNGLSNNLVTKTVRAALGDEHLFMDYLPHAI
REKYGLCEYNYAIRQIHFPEDMETLITARRRLVFDEFFLFILSMQYQKEKHVKEKNEFVF
AEDDFTDELIEQLPYELTNAQKKALADVKRDMRSETVMQRLIQGDVGSGKTIVAFLAMAD
TAHNGYQSAIMAPTEVLARQHYESYQSMCEQFGLHIPIVLLTGSMTAKQKRRAYEALEVY
SNAMIIGTHALIQEKAIYQNLALVITDEQHRFGVRQRETFAGKGTEPHVLVMSATPIPRT
LAIIIYGDLDISVIDEVPAKRLPIKNCVVDRRYRPKAYAFIEHEIREGHQAYVICPLVEE
SENMEAENVTDYAKRLREELPEDIVIGVLHGQMKAEQKNKIMDQFVKNEIQVLVSTTVVE
VGVNVPNATVMMIENAERFGLAQLHQLRGRVGRGDAQSYCIMVNASDSKNSMKRLDILNK
SNDGFKIASEDLKLRGPGDFFGIRQSGEMQFLLADIYQDASVLQQASEEVQDLLATDPEL
CEEENINLQHYLEIFFEDQKSRLNL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaattcccctttaagagaaattaaaggtgtcggcgccaaaacagaagaatta
tttcataagataggagtatacaccgtaggtgatatactccttcattatccccggacatat
atacagtatccgcaggcaaaacatgtggatgaggtactcgacggggaacaggcggcggtt
cttggacggatcacaagaacaccggtagtgcggaaggtgcgcaccatgcagatcacagtt
acgacgatcagtgagatgggagcctccttagagctggtatggtaccggatgccttatatg
aaaaataatttaaaagtcggcagcacttacattttttatggaaaagtcaataaaaagaat
ggaagacttgtcatggaacaggcagcaatgtttaccgaagaacagtatgcttccatggaa
caggtgtttttgccggtatacacactgacaaatgggctttccaataatcttgtcacaaag
acggtgcgtgcggcacttggagacgaacacttgtttatggattatctgccgcatgccatc
cgcgagaaatacggtctttgtgagtataattatgccatccgccagatccatttcccggag
gatatggagacactcattactgcgagaaggcggcttgtgtttgacgaatttttccttttt
attctaagcatgcagtatcagaaggaaaagcacgttaaagaaaaaaacgagtttgttttt
gcggaagatgattttacagatgaactgatagagcagctgccttatgaacttaccaacgca
cagaaaaaggcacttgcggatgtaaaacgcgatatgcgttccgagacggtcatgcagcgt
ctgatccagggtgatgtaggttccggtaaaacgatcgttgcgtttcttgcgatggcagat
actgcccacaatggctaccagtctgcaatcatggcaccgacggaggtgcttgcaagacag
cattatgagtcctatcagagcatgtgtgaacagtttggactccatattccgatcgtgctt
ctgacaggttccatgacggcaaaacagaaacgccgtgcatatgaggcactagaggtttat
tcgaatgctatgatcattgggacacatgcgctgattcaggagaaagcaatctatcagaat
cttgcgctcgtgatcaccgatgaacagcatcgttttggagtgcgtcagcgggagactttt
gccggaaaaggaacagaaccgcatgtgcttgtcatgagtgcaacaccgatcccgcgtact
ttggcaattattatttacggtgatctggatatttctgtgattgatgaagtcccggcaaaa
cggcttccaatcaaaaactgtgtggttgacaggagataccgccccaaggcatatgctttt
atcgagcatgaaatacgggagggacatcaggcatatgtgatctgtccgttagtggaagag
agtgaaaatatggaagcagaaaatgtcaccgattatgcaaaacgtctgcgggaagaactg
ccggaagacattgtgatcggcgttttacatgggcagatgaaagcagagcagaaaaataag
atcatggatcagtttgtaaaaaatgagatccaggtacttgtttccacaacggttgtcgag
gtcggggtcaatgtgccgaatgcgacggtcatgatgatcgagaatgcagaacggttcggg
cttgcacagcttcaccagctaagaggacgtgtcggaagaggagatgcccagtcgtattgt
attatggtcaatgcctcagacagcaaaaattccatgaagcggcttgatattttaaataaa
tccaacgatggatttaagattgcaagcgaagatttaaaactccgcggaccgggagatttc
tttggcatccgccagtccggtgagatgcagtttttactggcggatatctatcaggatgcg
tctgtattacagcaggcatctgaggaggtgcaggatctgcttgcgacagacccggaacta
tgtgaggaagaaaatataaacctgcagcactatctggaaattttctttgaagatcagaag
agcaggctcaatctttaa
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