Rhizobium jaguaris: CCGE525_20620
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Entry
CCGE525_20620 CDS
T05891
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rjg
Rhizobium jaguaris
Pathway
rjg01501
beta-Lactam resistance
rjg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rjg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CCGE525_20620
01503 Cationic antimicrobial peptide (CAMP) resistance
CCGE525_20620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rjg02000
]
CCGE525_20620
01504 Antimicrobial resistance genes [BR:
rjg01504
]
CCGE525_20620
Transporters [BR:
rjg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CCGE525_20620
Antimicrobial resistance genes [BR:
rjg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CCGE525_20620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AYG60949
UniProt:
A0A387FQP6
LinkDB
All DBs
Position
4223835..4226981
Genome browser
AA seq
1048 aa
AA seq
DB search
MSRFFIDRPIFAWVIAIIIMLAGALSIFTLSISQYPQIAPTTVRISATYSGADAQTVENS
VTKVIEQGMTGIDNLDYMASTSTSTGQASISLTFTNKANADVAQMQVQNKLQLVTAQLPQ
SVQNTGITVSKSTSNFLMVIGFVSTDGKLNSNDLADYVNSTLNDTLKRVPGVGDTQLFGA
GYAMRIWIDPDKLAKYQLMTSDVVSAIQAQNTQVSTGQLGALPQMPGQQLNATVTAKSRL
QTPEQFNNIILKSQSNGSLVRLNDVARVELGADSYTSSSAFNNQPSAGLAVMLASGANAI
NTAEAVQSTINGLKQTLPPNVEVVYPYDTTPFVKLSIEDVVKTLFEAIVLVFIVMFVFLQ
NIRATLIPTLAVPIVLLGTFGVLSAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
EEEGLSPREATIKSMQEITGALIGIATVLSAVFIPMAFFSGSVGVIYRQFSVTIVSAMIL
SVIVALILTPALCATILKRPEHGAKERGVFGLFNRNFDRGVRGYQRSVRGIIKGAPFFLV
LFVLIAGAVGYLFNHLSSSFLPDEDQGILITSVQLPPGATDYRTKDVLTQVRKYYLEKEK
PYVDAVFTVAGFGFNGQGQNVGLAFIKLKDFAERQTKESKAQAIAGRAMGAFSKIKDGSV
FALAPPAIPGFGSSSGFDFFIKDINSAGHDQLIAARNQLLGAAGKNPKLFGTRPNGQEDT
PQYSVVIDQEKASALNISLSNIDSTLSTAWGGTYVNDFIDRGRVKKVYVQADARFRMQPE
DFDRWYVRNSDGAMVPFSAFATGKWTYGSPRLERYNGSSAVEIQGAAAPGVSSGDAMNQI
DQIMASLPPGFSHEWTSLSAQEKLSGNQASQLYAISILVVFLALAALYESWSIPLAVMLS
VPIGIFGALLAATLFGQSNDVYFKVGLLTTIGLAAKNAILIVEFAIEQQNNGKDLIPATL
EAARQRLRPILMTSLAFILGVMPLAIANGAGSGSQNSIGIGVMGGMISATVLGIFFIPLL
FVSVRRIFKGGKRPTSTTASEPAPDTAH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtttcttcattgaccggccgatcttcgcctgggtcatcgccattattatcatg
ctggcgggcgcgctgtcgatcttcacgctgtcgatatcgcaatatccgcagatcgcgccg
acgacagtgcgcatcagcgcaacctattcaggcgccgatgcccagacggtcgaaaactca
gtgacaaaggtcatcgagcagggcatgaccggcatcgacaatctcgattacatggcctcc
acgtcgacgtcgacgggccaagcctcgatctcgctgaccttcaccaacaaggccaatgcg
gacgtggcccagatgcaggtgcagaacaagctgcagctcgtcaccgcgcaattgccgcag
tcggtccagaataccggtatcacggtgtcgaaatcgacctcgaacttcctgatggtcatc
ggcttcgtctcgaccgacggcaagctcaattccaacgaccttgccgactacgtcaacagc
accctgaacgacacgctgaagcgcgtcccgggtgtcggtgacacgcagctctttggcgcc
ggttacgccatgcgcatctggatcgatcctgacaagcttgcgaaataccagttgatgaca
tcagatgtcgtctcggcaatccaggcacagaacacgcaggtttcgaccggccagctcggt
gcattgccacaaatgccgggccagcagctcaatgcgacggtgacggccaaaagccgtctg
cagacgcccgaacaattcaacaacatcatcctgaagagccagtccaacggttcgctggta
cgcctcaacgacgtagctcgcgtcgaactgggcgccgacagctataccagctcgagtgcc
ttcaacaatcagccgtcggccggtctcgcggtgatgcttgcctccggagccaacgccatc
aacacggccgaggcggtgcagtcgacgatcaacggcctgaagcagacgctgccgccgaat
gtggaagtcgtttatccctatgacacgacgcccttcgtcaagctgtcgatcgaggacgtg
gtcaagacgctgttcgaagccatcgtgctcgtcttcatcgtcatgttcgtcttcctgcag
aacatccgcgccaccttgattccgacacttgccgttccgatcgttctgctcggcacgttc
ggcgtgctctcggccttcggctactccatcaatacgctcactatgttcggcatggtgctg
gcgatcggcctattggtggacgacgcgatcgttgtggtcgaaaacgtcgagcgcgtgatg
gaggaggagggtctgtcgccgcgcgaggcaacgatcaagtcgatgcaggaaatcaccggc
gccttgatcggcatcgccacggttctgtcggcggtgttcatcccgatggccttcttctcc
ggctcggtcggcgtcatctaccgtcagttctcggtgacgatcgtctcggccatgatcctg
tcggtcattgtcgcactcatcctgacccccgcgctttgcgccaccattctcaagagaccc
gagcacggcgccaaggagcggggcgtctttggcttgttcaaccggaacttcgatcgcggc
gtccgtggatatcagcgcagcgtgcgcggcatcatcaagggagcgcccttcttccttgtc
ctgtttgtgctgatcgccggcgccgttggttacctgttcaaccatctttccagctcgttc
ctgccggacgaagaccagggcatcctcatcaccagcgtgcaactgccgcccggtgcaacg
gactaccgcaccaaagacgtgctgacgcaggtcagaaagtactatctcgaaaaggaaaag
ccctatgtcgacgctgtcttcaccgtcgccggattcggctttaacggacagggacaaaac
gtcggccttgcctttatcaagctgaaggatttcgctgagcgtcagacaaaggaaagcaag
gcgcaggcgatcgccggacgtgccatgggggccttttcgaagatcaaggatggcagcgtc
ttcgcactcgcgccgccggcgatcccgggctttggcagctcctcaggcttcgacttcttc
atcaaggacatcaacagcgcggggcatgatcagctcattgccgcccgcaaccaattgttg
ggcgccgccgggaaaaaccccaaactgttcggcacgcgcccgaacggccaggaagataca
ccgcaatattcggttgtgatcgaccaggaaaaggcaagcgccctcaacatcagcctttcc
aatatcgactcgacactgtcgacggcctggggtggcacctatgtcaacgacttcatcgac
cgaggtcgcgtcaagaaagtctacgtacaggccgacgccaggttccgtatgcagccggag
gatttcgaccgctggtacgtgcgcaactccgatggcgccatggtgcccttctcggctttt
gccaccggcaaatggacctatggttcgccacgcctggaacgctataacggctcgtcggcc
gtcgaaattcagggtgctgccgccccaggcgtttcgtccggcgacgccatgaaccagatc
gaccagatcatggcgagcctgccaccgggcttcagccatgaatggacgagcctctcggcc
caggaaaaactctccggaaaccaggcgagccagctttacgcgatctccatcctggtcgta
ttcctggcgctggccgccctttacgagagctggtcgatcccgctcgccgtcatgctgtcg
gttccgatcggcatcttcggggcgctgctggcggccaccctcttcggacagtcgaacgac
gtctactttaaggtcggcctgctcaccacgatcggtctggccgccaagaacgccatcctg
atcgtcgaattcgccatcgagcagcagaacaacggcaaggacctgatccctgcgacgctg
gaagcagcccgccagcgcctgcggccgattctgatgacatcgctcgccttcatcctcggc
gtcatgccgctggctatcgcgaacggtgctggctccggcagccagaattcgatcggcatc
ggcgtcatgggcggcatgatctcggcgaccgtgctcggcatcttcttcatcccgctgctc
ttcgtctccgtccgccgcatcttcaagggcggaaagcgaccgacaagcaccacggcatcg
gagccagctccagacacggcgcactaa
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