Rhinichthys klamathensis goyatoka (western speckled dace): 130070232
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Entry
130070232 CDS
T09701
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130070232
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130070232
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
zf-RING_5
Prok-RING_4
DUF445
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
130070232
NCBI-ProteinID:
XP_056090526
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAESNISLAQDQFSCSICLDLLKDPVTIPCGHSYCMNCITGCWDQDDQKGVYSCPQCRQT
FTTRPVLGKNTMLAEVVEKLQKTKLQARPAQCYTESGDVECDVCTGDKNKAIKSCLVCLN
SYCQIHFERHEEFHPGKRHKVMDATGRLQEMICPQHEKLLEIYCRTDQNCICYLCMLDEH
KHHDTVSAAAERTEKQRQLEETQRKFQQRIEEKLKELEELREAVESHKRSAQAAVEESES
IFTELIRSIERSRSEVTQLIRDQEKTAVSRAEERLERLEQEFEDLRRRDAEMEQLSHTDH
HIHFLQSFQSLSVPPGSTDSLSITVSSRLSFEDVGKSVSQLREKLEHFCREETEKISGRV
RNINIIPTPEPKNHEEFLQYSLPLSLDSNTVNKSLVLSEWNRVIKYTLREQRYPDHPDRF
DGHPQVLCRESVCGRCYWEVEWSRGLEISVSYQSISRKGQGDECRFGCNDQSWSLSCYDS
SCSFWHNNKKTELPLVSCSSRIGVYVDHSAGTLSFYSVSDTMTLIHRVHTTFTRPLYPGF
RVIGIFTKIVDLFESDIL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatccaatatttctttggctcaggatcagttcagctgttcaatatgtctggat
ctactgaaggatccagtgaccattccctgtggacacagttactgtatgaactgtatcaca
ggctgctgggatcaggatgatcagaagggagtctacagctgccctcagtgcagacagacc
ttcactacaagacctgttttaggtaaaaacaccatgctggctgaagtggtggagaaactc
cagaagacaaaactacaagctcgtcctgctcaatgttacactgaatctggagatgtggag
tgtgacgtctgtactggggataaaaacaaagccatcaagtcctgtctggtgtgtctgaac
tcctactgtcaaattcattttgaacgtcacgaggaatttcacccaggaaagcggcataaa
gtgatggacgccactggacgacttcaggagatgatctgccctcaacatgagaaactactg
gagatttactgtcgtactgatcagaactgtatatgttatctgtgtatgttggatgaacac
aaacaccacgacactgtatcagctgcagcagagaggactgagaaacagagacagttggag
gaaacccagagaaaattccagcagagaatcgaggagaaactaaaggagcttgaggagctg
agagaggctgtagagtctcacaagcgctctgcacaggcagcagtggaggagagtgagagc
atctttactgagctgatccgctccattgaaagaagccgctctgaggtgacacagctgatc
agagaccaggaaaagactgcagtgagtcgagctgaagaacgactggagcgactggagcag
gagttcgaggatctgaggaggagagacgctgagatggagcagctttcacacacagaccat
cacatccatttcctccagagtttccagtctctctcagtccctcctggatctacagactca
ctcagcatcactgtcagttctcgtctctcttttgaggatgttggtaaatctgtttctcaa
ctgagagagaaacttgagcatttctgcagagaggaaacagaaaagatatctggcagagtg
agaaacattaacatcattcccacccctgaacccaagaaccatgaggagtttctccaatat
tcccttccgctctctttggattcaaacacagtgaataaaagcctggtactgtctgaatgg
aacagagtgattaaatacactctcagagaacagcggtatcctgatcatccagacagattt
gatggtcatcctcaggtgttgtgtcgagagagtgtgtgtggacgctgttactgggaggtt
gagtggagtagagggctggaaatatcagtgtcatatcagagcatcagcaggaagggacag
ggagatgagtgtagatttggatgtaatgatcagtcctggagtttgtcatgctatgactcc
agttgctcattctggcataacaacaaaaagactgaactccctttagtctcctgctcctct
agaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgac
acaatgaccctcattcacagagtccacaccacattcactcggcctctctatcctgggttt
cgggttattggaatttttacaaaaattgttgatttgttcgaaagtgacattctgtga
DBGET
integrated database retrieval system