Rhinichthys klamathensis goyatoka (western speckled dace): 130070327
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Entry
130070327 CDS
T09701
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130070327
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130070327
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_10
zf-RING_5
V_ATPase_I
Rrn6_HB
CoA_transf_3
DUF5446
Motif
Other DBs
NCBI-GeneID:
130070327
NCBI-ProteinID:
XP_056090670
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAEARISQDEFQCSVCLDLLKDPVTIPCGHSYCKICITGRWNQEDEKRVYSCPQCRQTFR
PRPALAKNTMLAEVVEKLKKTKLPADCYAGAGDVQCDVCNGRKRKAVKSCLGCLNSYCQS
HLEQHESFFKRKRHSLTDATGRLQEMICQTHDKLLEVFCCTDQKFICLLCMMDEHKNHNT
ESAAVQRTEKQKQLKKTQRSFQQRIQQREKDLQRLREAVASHKRSAQTAVEDSERIFTEL
IRSIERSRSEATQRIRDQEKTAVSRAEGRLERLEQEINDLRRRDAELEQLSHTQDHIHFL
QSFQSLSAPPESTDVNDNPFSPLSSFDGVRESVRQLREKLEAFCKEKKISDRATFTNIVP
RTRNDFLQYSHQFILDLNTVNKRLRLTEKNRVITNINTVQPYSGHPDRFDHYEQVLCTES
VCGRCYWEIEWSGDVLGAVYISVSYKSISRKGSGDECVFGYNDQSWSLICAYSGYSIIHN
NIETELPVKPISRRTGVCVDHRRIGVYVDHSAGTLSFYSVSDTMSLIHTVQTTFTQPLYP
GFRVYIGSSVKLC
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagaatttctcaggatgagttccagtgttcagtgtgtctggatctcctg
aaggatccagtgaccattccctgtggacacagttactgtaagatctgtattacaggacgc
tggaatcaggaggatgagaagagagtctacagctgccctcagtgcagacagaccttcagg
ccaagacctgctttagctaaaaacaccatgctggctgaagtggtggagaaactgaagaag
actaaacttcctgctgactgttacgctggagctggagatgtgcagtgtgacgtctgtaat
ggaagaaaacgcaaagctgtcaagtcctgtctggggtgtctaaactcttactgtcagagt
caccttgaacaacatgagagtttctttaaaagaaagagacacagtctaactgatgccact
ggacgactgcaggagatgatctgccaaacacatgataaactcctcgaggttttctgctgc
actgatcagaagtttatatgtttgctgtgtatgatggatgaacataaaaaccacaacact
gaatcagctgcagtgcagaggacagagaaacagaagcagctgaagaagacgcagaggtcg
ttccagcagaggatccagcagagagagaaagatcttcagcggctgagagaggctgtggcg
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatcttcactgagctc
atccgctccattgagagaagccgctctgaggcgacacagcggatcagagatcaggaaaag
actgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaggatcacatccatttcctg
cagagtttccagtctctctcagctcctcctgaatctacagacgtaaatgacaatcccttc
agtcctctctcctcttttgatggcgtgagagaatctgtccgtcagctgagagaaaaactg
gaggctttctgcaaagagaagaagatctctgacagagccactttcaccaacattgttccc
aggaccaggaacgacttcctacaatattcccatcagttcattctggatctgaacacagtg
aataaacgcctccgtctgactgagaagaacagagtgattactaacattaacacggtccag
ccgtactctggtcatccagacagatttgatcattatgagcaggtgttgtgtacagagagt
gtgtgtggacgctgttactgggagattgagtggagtggagatgtgcttggtgctgtatat
atatcagtgtcatataagagcatcagcaggaagggatcgggtgatgagtgtgtgtttgga
tataatgatcagtcctggagtttgatctgcgcttactccggttactcaatcatacacaat
aacatagagactgaactccctgtaaagcccatcagccgtagaacaggagtgtgtgtggat
cacaggagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtc
tctgacacaatgagcctcatacacacagtccagaccacattcactcagccactctatcct
gggtttagggtttatataggatcatcggtgaaactgtgttaa
DBGET
integrated database retrieval system