KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130070327
Entry
130070327         CDS       T09701                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rkg04121]
    130070327
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    130070327
Motif
Pfam: PRY zf-C3HC4_4 SPRY zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-B_box zf-C3HC4_3 zf-RING_2 U-box zf-RING_10 zf-RING_5 V_ATPase_I Rrn6_HB CoA_transf_3 DUF5446
Other DBs
NCBI-GeneID: 130070327
NCBI-ProteinID: XP_056090670
LinkDB
Position
Unknown
AA seq 553 aa
MAEARISQDEFQCSVCLDLLKDPVTIPCGHSYCKICITGRWNQEDEKRVYSCPQCRQTFR
PRPALAKNTMLAEVVEKLKKTKLPADCYAGAGDVQCDVCNGRKRKAVKSCLGCLNSYCQS
HLEQHESFFKRKRHSLTDATGRLQEMICQTHDKLLEVFCCTDQKFICLLCMMDEHKNHNT
ESAAVQRTEKQKQLKKTQRSFQQRIQQREKDLQRLREAVASHKRSAQTAVEDSERIFTEL
IRSIERSRSEATQRIRDQEKTAVSRAEGRLERLEQEINDLRRRDAELEQLSHTQDHIHFL
QSFQSLSAPPESTDVNDNPFSPLSSFDGVRESVRQLREKLEAFCKEKKISDRATFTNIVP
RTRNDFLQYSHQFILDLNTVNKRLRLTEKNRVITNINTVQPYSGHPDRFDHYEQVLCTES
VCGRCYWEIEWSGDVLGAVYISVSYKSISRKGSGDECVFGYNDQSWSLICAYSGYSIIHN
NIETELPVKPISRRTGVCVDHRRIGVYVDHSAGTLSFYSVSDTMSLIHTVQTTFTQPLYP
GFRVYIGSSVKLC
NT seq 1662 nt   +upstreamnt  +downstreamnt
atggcagaagccagaatttctcaggatgagttccagtgttcagtgtgtctggatctcctg
aaggatccagtgaccattccctgtggacacagttactgtaagatctgtattacaggacgc
tggaatcaggaggatgagaagagagtctacagctgccctcagtgcagacagaccttcagg
ccaagacctgctttagctaaaaacaccatgctggctgaagtggtggagaaactgaagaag
actaaacttcctgctgactgttacgctggagctggagatgtgcagtgtgacgtctgtaat
ggaagaaaacgcaaagctgtcaagtcctgtctggggtgtctaaactcttactgtcagagt
caccttgaacaacatgagagtttctttaaaagaaagagacacagtctaactgatgccact
ggacgactgcaggagatgatctgccaaacacatgataaactcctcgaggttttctgctgc
actgatcagaagtttatatgtttgctgtgtatgatggatgaacataaaaaccacaacact
gaatcagctgcagtgcagaggacagagaaacagaagcagctgaagaagacgcagaggtcg
ttccagcagaggatccagcagagagagaaagatcttcagcggctgagagaggctgtggcg
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatcttcactgagctc
atccgctccattgagagaagccgctctgaggcgacacagcggatcagagatcaggaaaag
actgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaggatcacatccatttcctg
cagagtttccagtctctctcagctcctcctgaatctacagacgtaaatgacaatcccttc
agtcctctctcctcttttgatggcgtgagagaatctgtccgtcagctgagagaaaaactg
gaggctttctgcaaagagaagaagatctctgacagagccactttcaccaacattgttccc
aggaccaggaacgacttcctacaatattcccatcagttcattctggatctgaacacagtg
aataaacgcctccgtctgactgagaagaacagagtgattactaacattaacacggtccag
ccgtactctggtcatccagacagatttgatcattatgagcaggtgttgtgtacagagagt
gtgtgtggacgctgttactgggagattgagtggagtggagatgtgcttggtgctgtatat
atatcagtgtcatataagagcatcagcaggaagggatcgggtgatgagtgtgtgtttgga
tataatgatcagtcctggagtttgatctgcgcttactccggttactcaatcatacacaat
aacatagagactgaactccctgtaaagcccatcagccgtagaacaggagtgtgtgtggat
cacaggagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtc
tctgacacaatgagcctcatacacacagtccagaccacattcactcagccactctatcct
gggtttagggtttatataggatcatcggtgaaactgtgttaa

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