Rhinichthys klamathensis goyatoka (western speckled dace): 130070672
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Entry
130070672 CDS
T09701
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130070672
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130070672
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_10
U-box
zf-RING_5
Prok-RING_4
zf-RING_6
YvrJ
V_ATPase_I
MRP-S31
DUF5446
Motif
Other DBs
NCBI-GeneID:
130070672
NCBI-ProteinID:
XP_056091130
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MAEARFSQDEFLCSVCQDLLKDPVTIPCGHSFCKICITGRWDQEDEKRVYSCPQCRQTFR
TRHALAKNTMLAEVVEKLKKRKLPADCYAGAGDVQCDVCTGRKRKAIKSCLGCLESYCQS
HLEQHESLCKRKRHNLTDATGRLQEMICQKHDKLLEVFCRTDQKCICVLCMMDEHKNHNT
VSAAAQRTKKQHQLKETQRSFQQRIQQREKDLQQLREAVASHKRSAQTAVEDSERIFTEL
IRSIERSRSEATQRIRDQEKTAVSRAEGRLEQLEQEINDLRRRDAELEQLSHTQDHIHFL
QSFQSLSAPPESTDVNDNPFSSLSSFDGVRESVLRLRDKLEDFCKEELKKIISDRVTFTN
IVPRTRNDFLQYSHPLTLDLNTVNKDLCLSERNRMITNTNTVQPYPDHPDRFNDVYQVLC
RESVCGRCYWEIEWSGDYVFISVSYKSISRKGSGDECGFGSNAQSWSLICSSSSYSFRHN
NRETKLPVKPISSRAGVRVDHRRIGVYVDHSAGTLSFYSVSDTSSLIHTVQTTFTHTLYP
GFRLDPGLSLYNTPSVKLLMSENRL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccaggttttctcaggatgagttcctgtgttcagtgtgtcaggatctcctg
aaggatccagtgaccattccctgtggacacagtttctgtaagatctgtattacaggccgc
tgggatcaggaggatgagaagagagtctacagctgccctcagtgcagacagaccttcaga
acaagacatgctttagctaaaaacaccatgctggctgaagtggtggagaaactgaagaag
cgtaaacttcctgctgactgttacgctggagctggagatgtgcagtgtgacgtctgtact
ggaagaaaacgcaaagccatcaagtcctgtctggggtgtctggagtcttactgtcagagt
caccttgaacaacatgagagtttgtgtaaaagaaagagacacaatctgactgatgccact
ggacgactgcaggagatgatctgccagaaacacgacaagctccttgaggttttctgccgc
actgatcagaagtgtatatgtgtgttgtgtatgatggatgaacataaaaaccacaacaca
gtatcagctgcagcgcagaggacaaagaaacagcaccagctgaaggagacgcagaggtcg
ttccagcagaggatccagcagagagagaaagatcttcagcagctgagagaggctgtggcg
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatcttcactgagctc
atccgctccattgagagaagccgctctgaggcgacacagcggatcagagaccaggaaaag
actgcagtgagtcgagctgaaggacgactggagcaactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaggatcacatccatttcctg
cagagtttccagtctctctcagctcctcctgaatctacagacgtaaatgacaatcccttc
agttctctctcctcttttgatggcgtgagagaatctgtccttcggctgagagacaaactg
gaggatttctgcaaagaggagctcaagaagatcatctctgacagagtcactttcaccaac
attgttcccagaaccaggaacgacttcctacaatattctcatccgctcactctggatctg
aacacagtgaataaagacctctgtctgtctgagaggaacagaatgattactaacactaac
acagtccagccgtatcctgatcatccagacagatttaatgatgtgtatcaggtgttgtgt
agagagagtgtgtgtggacgctgttactgggagattgagtggagtggtgattatgtgttt
atatcagtgtcatataagagcatcagcaggaagggatcgggtgatgagtgtggatttgga
tctaatgctcagtcctggagtttgatctgctcttcctccagttactcattcagacacaat
aacagagagactaaactccctgtaaagcccatcagcagtagagcaggagtgcgtgtggat
cacaggagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtc
tctgacacatcgagcctcatacacacagtccagaccacattcactcacacactctatcct
gggtttaggcttgatcctggattatctctttataacacaccatcagtgaaactgttgatg
agtgagaacagactgtag
DBGET
integrated database retrieval system
