Rhinichthys klamathensis goyatoka (western speckled dace): 130070680
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Entry
130070680 CDS
T09701
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130070680
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130070680
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
V_ATPase_I
MRP-S31
Y1_Tnp
PI3K_P85_iSH2
zf-C2H2
XhlA
Motif
Other DBs
NCBI-GeneID:
130070680
NCBI-ProteinID:
XP_056091142
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MAEARFSQDEFLCPVCLDILKDPVTIPCGHSYCKICITGCWDQENQMRVYRCPQCRQTFR
RRPALAKNTMLTEVVEKLKRKLPADCYAGAGDVQCDVCTGRKHKAIKSCLGCLNSYCQSH
LEQHESFFKRKKHNLTDATGRLQEMICQKHDKLLEVFCRTDQKCICVLCMMDEHKNHNTV
SAAAQRTEKQHQLKETQRSFQQRIQQREKDLQQLREAVASHKRSAQTAVGDSERIFTELI
RSIERSRSEATQRIRDQEKTAVSRAEGRLKELEQEINDLRRRDAELEQLSHTQDHIHFLQ
SFQSLSAPPESTDVNDNPFSSLSSFDGVRESVLRLRDKLEDFCKEELKKIISDRGKVLEI
LLSEPRTRNDFIQYSHRLTLDLNTVNKRLLLSERNRVITNTDTEVQSYPDHPDRFDDDPQ
VLCRESVCGRCYWEIEWSGRSVFISVSYKSISRKGVGYECVFGYNDQSWSLFCSPSSYSI
IHNNIKTELPVKPISRRIGVYVDHSAGTLSFYSVSDTTSLIHTVQTTFTHTLYPGFRLYY
PGSSVKLC
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcaaggttttctcaggatgagtttctgtgtccagtgtgtctggatattctg
aaggatccagtgaccattccctgtggacacagttattgtaagatctgtattacaggctgc
tgggatcaggagaatcagatgagagtctacagatgccctcagtgcagacagaccttcaga
agaagacctgctttagctaaaaacaccatgctgactgaagtggtggagaaactgaagcgt
aaacttcctgctgactgttacgctggagctggagatgttcagtgtgacgtctgcactgga
agaaaacacaaagccatcaagtcctgtctggggtgtctgaactcttactgtcagagtcac
cttgaacaacatgagagtttctttaaaagaaagaaacacaatctgactgacgccactgga
cgactgcaggagatgatctgccagaaacacgacaagctcctcgaggttttctgccgcacc
gatcagaagtgtatatgtgtgctgtgtatgatggatgaacataaaaaccacaacactgta
tcagctgcagctcagaggacagagaaacagcaccagctgaaggagacgcagaggtcgttc
cagcagaggatccagcagagagagaaagatcttcagcagctgagagaggctgtggcgtct
cataagcgctctgcacagacagcagtgggggacagtgagaggatcttcactgagctcatc
cgctccattgagagaagccgctctgaggcgacacagcggatcagagatcaggaaaagact
gcagtgagtcgagctgaaggacgactgaaggaactggagcaggagatcaatgatctgagg
aggagagacgctgagctggagcagctttcacacacacaggatcacatccatttcctgcag
agtttccagtctctctcagctcctcctgaatctacagacgtaaatgacaatcccttcagt
tctctctcctcttttgatggcgtgagagaatctgtccttcggctgagagacaaactggag
gatttctgcaaagaggagctcaagaagatcatctctgacagaggtaaagtcctggagatt
ctgctctcagaacccagaaccaggaacgacttcatacaatattcccatcggctcactcta
gatctgaacacagtgaataaacgcctccttctgtctgagaggaacagagtgattactaac
actgacacagaggttcagtcgtatcctgatcatccagacagatttgatgatgatcctcag
gtgttgtgtagagagagtgtgtgtggacgctgttactgggagattgagtggagtgggaga
agtgtgtttatatcagtgtcatataagagcatcagcaggaagggagtgggttatgagtgt
gtgtttggatataatgatcagtcctggagtttgttctgctctccctccagttactcaatc
atacacaataacataaagactgaactccctgtaaagcccatcagcaggagaataggagtg
tatgtggatcacagtgcaggaactctgtccttctacagcgtctctgacacaacgagcctc
atacacacagtccagaccacattcacacacacactctatcctgggtttaggctttattat
cctggatcatcagtgaaactgtgttga
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integrated database retrieval system
