Rhinichthys klamathensis goyatoka (western speckled dace): 130070745
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Entry
130070745 CDS
T09701
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03022
Basal transcription factors
rkg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130070745 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
130070745 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130070745 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130070745 (gtf2h2)
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130070745 (gtf2h2)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130070745 (gtf2h2)
BRITE hierarchy
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
C1_2
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
130070745
NCBI-ProteinID:
XP_056091221
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKATVEDILFQAKRKRVFESHGQVRLGMMRH
LFVIIDSSRSMEDQDLKPNRLTSTLKLMEYFVEEYFDQNPISQIGIIATKNKRAEKLTDL
AGNPKKHIAALKKAVDSTCVGEPSLYNSLNVAMQTLKHMPAHTSKEILVIFSSLTTCDPA
NIYELIKTLNGLKIRVSVIGLSAEVRVCTILTRETGGTYNVILDESHFKELLMQHVKPPP
ASSSSECSLIRMGFPQHVIASMSDQDAKPSFSMSHLDSTGEPVLSLGGYYCPQCRAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLEAFQETPLEEYEGERFCEACQGELKDKSVFTC
LACKKVFCVECDLFIHDTLHSCPGCMQTDGTS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagaacaaaacgctgggaaggaggatacgaacgaacatgggag
gtgctgaaggaggatgagtctggatctctcaaagctactgtggaggacattcttttccag
gcaaagaggaaaagagtgtttgagagtcatggacaagttcggcttgggatgatgcggcac
ctttttgtgatcattgactcatctagatcaatggaagatcaagaccttaagcccaacagg
ctgacctccaccctgaagctgatggagtattttgtcgaggaatactttgaccagaatcca
atcagtcagatagggatcattgccaccaagaacaagagggcggagaagctcactgatctt
gcagggaaccctaagaagcatatagcagctctgaagaaagctgtggactccacatgtgtc
ggggaaccgtccctctacaactctctcaacgtggctatgcagactctgaaacacatgcct
gctcatacaagcaaagagatcctggttattttcagcagtctcactacctgtgacccagcc
aacatctatgagcttatcaaaactctgaatggtttgaaaatcagagtgtctgtgatcggc
ctgtcagcagaggtccgagtgtgtactattctcacaagagaaaccggaggaacatacaat
gtgatactggatgagagtcattttaaagagcttctgatgcagcatgtgaagcctcctcct
gccagctcctcctcagagtgctccctcattcgcatgggtttcccccagcatgtcatagcc
tccatgtctgatcaggatgccaaaccctcgttcagcatgtcgcacctagacagcactggt
gagccagtactcagtctcggcggctactactgcccacagtgccgagctaaatacactgag
ctgcccgtggagtgtaaagtgtgtggtctgactttagtttccgctccacacttggcccgt
tccttccaccacctcttccccctggaggccttccaggagaccccactggaggagtatgag
ggagagaggttctgtgaagcttgccaaggagagttgaaggacaaaagtgtgtttacttgt
ctagcgtgtaaaaaagtgttctgtgtggaatgtgatctcttcatacatgacacactgcac
tcctgtcccggctgcatgcagactgacgggacgtcctga
DBGET
integrated database retrieval system
