Rhinichthys klamathensis goyatoka (western speckled dace): 130071113
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Entry
130071113 CDS
T09701
Symbol
dennd5b
Name
(RefSeq) DENN domain-containing protein 5B isoform X1
KO
K20164
DENN domain-containing protein 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130071113 (dennd5b)
Membrane trafficking [BR:
rkg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130071113 (dennd5b)
BRITE hierarchy
Motif
Pfam:
DENN
RUN
uDENN
dDENN
PLAT
DGCR6
PAP1
Motif
Other DBs
NCBI-GeneID:
130071113
NCBI-ProteinID:
XP_056091706
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MSATMSGSGSAPCRFAHYFIICGIDNETGLEPDALAALYQWLEADRQGKDPEALAAGENF
DQSPLKRTFKSKVLAHYPENIECSPFDQDAVNMLCMPKGLSFRTQRDSRTPQFHSFLITR
EDGSRTYGFVHTFYEEVTSPQICSAMQTLLQMHQAEHNTSAHNCPSSSSSSSSSMDSLAS
SLDEVESPSSSSLSQGGRRSCGCSGEGYDSVRDTLYVSKAMCLITPMPFMHACKRFLSQI
HLAVTSHQPPPLPLESYVYNILYEVPLPPPGRSLKFHGVYEPILCQRPGVGELPLADFPL
GEAFRLLGVENLVQLFTCVLLEMQILLYSQDYQRLMVVAEGITTLLFPFQWQHVYVPILP
ASLLHFLDAPVPYLMGLQSKEGTDRSKLELPQEANLCFVDVDNHCIELPEDFPQFPNKTE
FIKELSEVLLSFGLSPAGGNTSPGPAISTQSSTLEKELKSTSLRELVDDKRNGNLGGEAL
DMLELLQGNPTLERLQALAKRTGVKVARLEALAAGQKAVGDEGVGGRSPVEEEELRNAKL
NVQLREVFAARFATMFADYESFVIQNSPDLESWLTNREQMHNFDKASFLSDQPEPYLPFL
SHFIETQMFATFIDNKIMSQWEEKEPLLRVFDGRIEKARLYNVRAPSLRSSVYQKCTFLK
ESAQAIEQRLRKIDHTAIHPHLLDMKIGQGKYQQGFFPKLQADVLASGPTNKWSNRTCST
QRRVDRHRQQNEHLVLDNDLKEKYMQEARNLGKNLRQPKLSDLSPAVIAQTNWKFVEGLL
KECKMKTKRMLVEKMGREAVELGHGEANITGLEENTLIASLCDLLERIWSHGLLVKQGKS
ALWSHLLHYQAREEKNELLSESPVSNGQERRKSESSVGLPALRVSVIQDMRHIQNMGEIK
TDVGRARAWIRLSLEKKLLSQHLKQLLSNQALTKKLYKRYAFLRCEEEKEQFLFHLLSLN
AVDYFCFTSVFTTIMIPYRAVIIPIKKLSNAMTTSNPWLCVSGELGDSGTLQITKNVLEM
TFDSAFRPHTHISIAFKRQNLGKLTTVQLGHDNSGLLAKWLVDCVMVRNEITGHTYKFPC
GRWLGKGVDDGSLERVLIGEFVVPCNDDEGGRGAKTPPLQRSPSQIRRISITSLTGRGNK
PTTVQIQESIGEAVNNIIKHYHKPEKERGSLTVLLCGEGGLVWALEQFFQHGFRSARIFQ
KNVFVWDFYERVVAFMDNADQIGDLQEIPEPLGLNCESFCRYVNAINNMPRNIGKDGKFQ
LLVCLGARDRLLPQWLPLLAECPVITRMYEENALLRDKLTVSSLVGVLETLNDFPITLET
SFTKSVEL
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgactatgagcggctctgggtcagcgccctgtcgcttcgcacattacttcatc
atatgcggaatagacaacgaaactggtctagagcccgatgctttggcagctttgtaccaa
tggctagaggccgatcgacagggcaaggacccagaggccttggcagcaggggaaaacttt
gatcagagccccctcaaaaggacctttaaatccaaagttctggcccactacccagagaac
atcgagtgcagcccatttgaccaggatgctgttaacatgctctgcatgcccaaaggtctg
tccttccgaacacagcgtgacagtcggaccccacagttccactctttcctcatcacaaga
gaagacggctctcgcacttatggtttcgttcacaccttctacgaggaggtgaccagccct
cagatctgctccgccatgcagacgctactccagatgcaccaagcggagcataatacatca
gcgcataactgcccttcgtcgtcctcttcctcctcctctagcatggactctttagccagc
agcctggatgaagtcgagtctccttcctcatcttcattatcacaagggggtcgcaggagc
tgtggctgctctggcgaaggatacgactctgttcgcgacactctatacgtgtctaaagcc
atgtgtctaatcacgcctatgcccttcatgcacgcctgtaaacgcttcctgtcccagatc
cacctggccgtcacttcacatcagccacccccactccctttggaaagctacgtctacaac
atcctctatgaggtacccttgccaccccctggacgctctttaaagttccacggagtgtat
gaacctattctgtgccagaggcctggtgttggggagctgccattggctgattttccattg
ggtgaggccttccgattgttaggtgtggaaaatctggtgcagcttttcacttgtgttctg
ctggagatgcagatcctcctctactcacaggactaccagaggctcatggtggttgcggag
ggaatcacaacgttgctgttcccattccaatggcagcatgtgtacgtgcccatccttccc
gcttccctgctgcacttcttggacgcccctgtgccctatctcatgggcctgcagtccaaa
gagggcacggaccgctccaaactagagctgcctcaagaggcaaacctgtgtttcgttgac
gtcgacaaccactgcatcgaactgcctgaagactttcctcagttccccaacaagaccgaa
ttcatcaaagaactcagtgaggtgttgctaagttttggcctgtctcccgcgggaggcaac
acctcccctggacctgccatcagcacgcagtcctccacgctggagaaggagctgaagagc
acatccttgagagagttagtggacgacaaaaggaacggcaacctcggtggggaggcactg
gacatgctggaacttcttcaaggcaacccgaccctggagcgtttgcaggctctggccaaa
aggactggggtgaaagtggcccgtctggaggcattggcagcgggacagaaggccgtaggg
gacgagggcgttggaggaaggtctcctgttgaggaagaggagctgaggaacgctaaactg
aacgtgcagctgagggaggtgttcgccgcacgcttcgcgacaatgtttgcggactacgag
tcatttgtgattcagaactcgccagatttggagtcctggctgacaaacagagagcaaatg
cacaactttgacaaggcctcattcctttcagaccagccggaaccgtatttgcccttcctg
tcccatttcatcgaaacgcaaatgtttgccaccttcatcgacaacaagatcatgtctcaa
tgggaggagaaagagcccctcctacgagtgtttgacggacgcattgagaaggcccgcctc
tacaacgtccgcgcccccagcttgcgctcatctgtttaccagaaatgcacgttcctgaag
gaatcggcccaggccatagagcaacggctgagaaagatcgaccacacggccatccatcct
cacctgctggatatgaagattggccaaggaaaataccagcagggcttctttcccaaacta
caggctgatgtgcttgcctcagggcccaccaacaagtggtccaatcgcacatgctcgact
cagcgcagagtggaccggcacagacagcagaacgaacatcttgtgctagacaatgacctc
aaagagaagtacatgcaggaggcccgtaacctggggaagaacctgagacaacccaaatta
tcagacctctcccctgcagtcatcgctcagaccaactggaagtttgtggagggtttactg
aaagaatgcaagatgaagaccaagcgtatgttggtggagaaaatgggcagagaggctgtt
gaactgggacatggagaggcaaacatcaccggtctggaggagaacacgctcatagccagt
ctgtgtgacctgctggagagaatatggagccacggcctactggtcaaacagggaaagtct
gcgctgtggtctcatctattgcactatcaggcaagagaagagaaaaacgagctgctgtca
gagtctccagtgtctaatggccaggaaagacgaaagtcagagtccagtgttggtcttcct
gcattacgtgtctcagtcatacaggacatgagacacatccagaacatgggagagattaag
accgatgtaggtcgagcacgtgcctggatccgtctgtccctggagaaaaaactactttcc
cagcatctcaaacagctgctgtctaaccaggctttaaccaagaagctgtacaagcggtac
gctttcttgcgctgcgaagaggaaaaagaacagtttctctttcatctcctgagcctgaat
gcagtggactacttctgctttaccagcgtcttcaccaccataatgattccgtaccgggcc
gtcatcatccctatcaagaagcttagtaacgcgatgacgacgtccaacccttggctgtgt
gtgtccggcgagctaggcgactccggcaccctgcagatcacgaagaatgttctggaaatg
acgtttgactctgcctttaggcctcacacgcacatctccatcgccttcaagcgtcagaac
ctcgggaagttgacaacagtgcagctgggtcatgataattctggcttgcttgccaagtgg
ctggtggattgtgtcatggtccgcaatgagatcactggccacacatacaagttcccgtgc
ggcaggtggctagggaaaggtgtggatgatggcagtcttgagcgagttctgatcggtgaa
tttgtagttccgtgcaatgatgatgaaggaggccgaggggctaagactccgccccttcag
cgatcgccttcccagatccgacgaattagcatcacatcacttacaggacgtggaaacaaa
ccaaccaccgttcagatacaggaatccatcggtgaagcagtcaacaatattatcaagcat
taccacaaaccagagaaagagaggggcagtcttacggttctgctgtgtggtgagggtggt
ctggtgtgggcactggagcagttcttccaacatggattccgctccgctcgaatctttcag
aaaaatgtctttgtgtgggatttctacgagagagtagtagcgtttatggacaatgcagat
cagattggagacctccaagaaataccagagcctcttggtctgaattgtgaatctttctgt
cgatacgtcaacgccattaacaatatgccacgcaacattggcaaggatggcaagttccag
ctgctagtttgcctcggggcaagagaccggttattgccgcagtggctccctctgctggcc
gaatgcccggtcatcacacgcatgtacgaggagaacgcgttacttcgagacaagctcacc
gtcagctctctcgtcggtgtcctggaaacgctcaatgactttcccatcactctggagacc
tcctttacgaaaagcgttgagctgtga
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integrated database retrieval system
