Rhinichthys klamathensis goyatoka (western speckled dace): 130073370
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Entry
130073370 CDS
T09701
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130073370
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130073370
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
zf-RING_6
U-box
Motif
Other DBs
NCBI-GeneID:
130073370
NCBI-ProteinID:
XP_056094707
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MADASILWSRDTFNCSICLDLLKNPVAIPCGHSYCMVCITGSWDQDDRKGVYSCPLCRQT
FTSRPVLGKNTMLAEVVEKLQKTKLQARPAQCYTESVNVECDICSGDKNKAIKSCLVCLN
SYCQNHLEQHKIFFKSKRHNLMDATGRLQEMICPQHEKILEIYCRTDQHCICYLCKMDEH
KNHETVSAAAERTEKQRRLGEIQRKYQQRIEEKLKDLQKLRKAVESHKRSAQAAVEDSES
IFTELIRSIERSRSEVTQLIRDQEKTSVSRAEERLERLEQEIEDLRRRDTEMEQLSHTDH
HIHFLQSFQSLSVPPGSTDSPSITVSSRLSFDVVGKSVSQLRDKLEHFCREEIEKISDRV
TCFEIIPTPELKTREEFLQYSHQLTVDLNTVNENLVLSEGNRVIKYTDKVQRYPDHPDRF
DFYNQVLSKESVCGRCYWEVERSGKVEIAVSYQSISRKGEGDECRFGCNDQSWSLSCYDS
SCSFWHDYTETKLPVVSSSSRIGVYVDHSAGTLSFYSVSDTMTLIHRVHTTFTRPLYPGF
EFISECKKESKLKLCEL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgccagtattttatggtctcgggatacatttaactgttcaatatgtctggat
ctactgaagaatccagtggccattccctgtggacacagttactgtatggtctgtatcaca
ggctcctgggatcaggatgatcggaagggagtctacagctgccctctgtgcagacagacc
ttcacttcaagacctgttttaggtaaaaacaccatgctggctgaagtggtggagaaactc
cagaagacaaaactacaagctcgtcctgctcagtgttacactgaatctgtaaatgtggag
tgtgacatctgttctggagacaaaaacaaagccatcaagtcctgtctggtgtgtctgaac
tcttactgtcaaaatcatctggaacaacataagattttcttcaaaagtaagagacacaat
ctaatggacgccactggacgtcttcaggagatgatctgtcctcaacatgagaaaatactg
gagatttactgtcgtactgatcaacactgtatatgttatttgtgtaaaatggatgaacac
aaaaaccatgagactgtttcagctgcagcagagaggactgagaaacagagaagattgggt
gagatacaaagaaaataccagcagagaatcgaggagaaactgaaggaccttcagaagttg
agaaaggctgtagagtctcacaagcgctctgcacaggcagcagtggaggacagtgagagc
atctttactgagctgatccgctccattgagagaagccgctctgaggtgacacagctgatc
agagaccaggaaaagacttcagtgagtcgagctgaagaacgactggagcgactagagcag
gagatcgaggatctgaggaggagagacactgagatggagcagctttcacacacagaccat
cacattcatttcctccagagtttccagtctctctcagtccctcctggatctacagactca
cccagcatcactgtcagttctcgtctctcttttgatgttgttggtaaatctgtttctcaa
ctgagagacaaactggagcatttctgcagagaggagatagagaagatatctgacagagta
acatgctttgagattattcctacccctgaactcaagaccagggaggagttccttcagtat
tctcatcaactcactgtggatttaaatacagtgaatgaaaacctggtactgtctgagggg
aacagagtgattaaatacactgacaaagtccagcggtatcctgatcatccagacagattt
gatttttataatcaggtgttgagtaaagagagtgtgtgtggacgctgttactgggaggtt
gagaggagtggtaaggtggaaatagcagtgtcatatcagagcatcagcaggaagggagag
ggagatgagtgtagatttggatgtaatgatcagtcctggagtttgtcctgctatgactcc
agttgctcattctggcacgattacacagagactaaactccccgtagtctccagttcctct
agaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgac
acaatgaccctcattcacagagtccacaccacgttcactcggcctctctatcctgggttt
gagttcatctcagaatgcaaaaaagaatcaaaattgaaactgtgtgaattataa
DBGET
integrated database retrieval system