Rhinichthys klamathensis goyatoka (western speckled dace): 130073456
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Entry
130073456 CDS
T09701
Symbol
nrde2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130073456 (nrde2)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130073456 (nrde2)
BRITE hierarchy
Motif
Pfam:
NRDE-2
TPR_14
SURF2
Motif
Other DBs
NCBI-GeneID:
130073456
NCBI-ProteinID:
XP_056094850
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
MALFPSCAGLSGINSSAEDRAPADLEWLSNQSFNREDALKTHQRATDRVQAEEPAGTSEQ
KRKEREDSHGRSKKRKKKKKKKLKKKSRDNSESSGSESDTIYPSDLLKKDNADREEAQVR
VSETFMWLDDLQTPTDSPFCIDRRADRANWEYKSLYRGDIARYKRKGDSCLGLDFRMQDV
NWADKGPKKKRLVKKPERYFCPSTLQRLRSDSLPALPILSEGSAATSDSYIKLPACSEEQ
GSSTQAPVSWVNPLGIYDPGTSLWLEGKGQPEAKGDQQGVKVQGSSSTLLSARVEEFNRK
LRENPTDIQMWLDFVHFQDELAFGSGSFSADSDGDSDMRKMSIRAVLEKKLSIVDRAVES
NPANVDLKLKKLCLCKELWEPAILQKEWKKLVFVHPNSAPLWRKYLLFTQSHFSTFSVSK
VNSVFGKCLSTLSAVQDGSMVSHPPLPGTQEGLLDIFLQQCHFLRQAGHTEKAVCLFQAL
LDFTFFKPDSVKDLPTRQQVEFFEPFWDSGEPRIGERGARGWNAWMLQQERGGWVIPPEP
DDEDEEEQEESEIKDKTRPKWKIWLDVETSREANNWLPWRPDKTKGQSEEDCEDPDRQVL
FDDIGPSVIRVDRPDLQLQVILSFLQFLGLPGPSGRFSTTSSSNILLDDLTFLEEGPDQE
RPLTSYDLPMAGICAVGHMTFLSDCRRQAGLCKAGEEFLQNVLQQTLPLVSAQDQAAITL
CWLQYEKLKVLRCLRSGNKRQLKSQGKRSKRLAKRLLKEPDNRGSLALWREYAYLEWLLG
NLEEARNVFDTALGMGVSRGLNDPVLCNLCFLYAQLEVEQALSGGAASTSSKAVYILTKL
AEGAAYTPFSGQINPVAILKARKAYEQALLSFLPEQSTDSDAGAPKKLCRTSSLVGCFGL
FQYLTMGIDAADAVYNHAIQKLIPTNLNSEVTDDSLRRCKVFADWESVAVQRVALLRHHT
NTNVFPLSRLRLALTDAISLLPSSALLWHLYLQTENRYHSAGRARRFFHSVAKKTDSVVP
YLFAITAERRLKQLLDSQRSRHPGEALPGQSVIGLSNRIRCLFETATATEHGAHCPLLWR
MYLNFMVCDGTAESGSGIFYKALQEVPWVKGLYMDAVQLFPERVQEILDLMTEKELRLRV
PMEEVDILLEE
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtttccgtcctgcgctggactgtcaggcattaacagctctgctgaggataga
gctccagcagatctggaatggctgagtaatcagagcttcaacagagaagatgctttgaag
actcaccagcgtgccacagacagagtgcaagcagaggaaccagcaggcacaagtgagcag
aagcggaaagagagagaagatagccatggtagatcgaagaagagaaagaaaaagaagaag
aaaaaactcaagaagaagagcagagataattctgagagcagtggttctgaatccgacacc
atttaccccagcgacctgctaaaaaaggacaatgccgacagagaggaagctcaggttcgg
gtgagcgagacctttatgtggctggatgacctccagacccccactgactcccccttctgt
atcgacaggagagctgaccgtgccaactgggaatacaaatccctttatagaggagacata
gccaggtataagaggaagggagactcatgcctaggtttggactttaggatgcaggatgta
aactgggccgacaaaggcccaaagaagaagcggctggtcaagaaacctgagcgctatttt
tgtccttccacccttcagcggctgcggtcagatagtctgccagctttgcccatactctct
gagggcagtgccgccacctctgattcatacatcaagctcccagcctgcagtgaagagcag
ggctcttccacccaggcacctgtatcatgggtcaatccgctcggcatctatgaccctgga
acctctctgtggttggagggcaagggtcaaccggaggccaagggagatcagcagggcgtt
aaggttcaaggaagcagcagcacccttctgagcgcacgggtggaggagtttaacaggaag
ctacgggagaatcctacagacatccagatgtggctggacttcgtacacttccaggatgag
ctggccttcggttctgggtctttctctgctgacagtgacggcgacagtgacatgagaaag
atgtctattcgtgctgtgctggagaagaagctgtccatagtggacagggcggtggaaagt
aacccggccaacgtggacctgaaactgaagaaactctgcttgtgcaaggaactatgggag
cctgccatcctgcagaaagagtggaagaaactagtgtttgtccatccaaacagtgcccct
ttatggaggaagtacctcctcttcacacagagtcatttcagcactttctcagtgtcaaag
gtcaacagcgtattcggaaaatgtctgagcacgctcagtgcagtccaggatggcagtatg
gtgtctcaccctccacttccaggcacacaggaaggcctcttggatatcttcctacagcag
tgccatttcctgcggcaagcaggtcacacagagaaagctgtgtgtctcttccaagccctg
ctggacttcactttcttcaagccagacagtgtgaaagatctacccactagacagcaggtg
gaattttttgagccattttgggacagtggagagcccaggataggggagcggggggctcgg
ggatggaatgcttggatgcttcagcaggagagaggaggatgggtgattccacctgagcca
gatgatgaagatgaagaagagcaggaggagtcagagatcaaagacaagaccaggcctaaa
tggaagatctggttagatgtagagacgtcccgtgaggcaaacaactggttgccatggaga
ccagataaaaccaagggccaatcagaagaggactgcgaggaccccgacaggcaggtattg
tttgatgatatcggcccatctgtgattcgtgtggacagaccagatctccagctgcaggtg
atcctgtcattcctgcagttcctaggtctgcctggaccttcaggaaggttttctacaacc
tcttcctcaaacattctactggatgatctcaccttccttgaagagggcccagaccaggag
cgacctctgacctcttatgacctcccaatggctgggatctgtgcagtgggtcacatgaca
tttctgagtgactgcaggaggcaggctgggctgtgtaaggcaggggaggagtttctccag
aacgttctacagcaaactctaccgctcgtttctgcacaggatcaagctgctattactctc
tgctggctgcagtatgagaaactcaaggtgctgagatgtttacgcagtggaaataaaagg
caactgaagtctcagggaaagcgtagtaaacgactagcgaaacggctcctaaaagagccc
gataacaggggaagtctggcactttggagagagtatgcctatctagagtggcttctgggt
aacctggaagaggcgcgcaacgtatttgacactgccttgggtatgggtgtatctagaggt
cttaatgaccctgttctctgcaacctctgctttctctatgcccagttagaggtagagcag
gccttaagtggtggggcagcctccacttcctccaaagctgtctacattctcactaaatta
gccgagggtgctgcttacactcctttctctggccagatcaacccagtggccatattgaag
gccaggaaggcctatgagcaggccctgttgagctttttacctgagcagagcacagacagc
gatgctggagctccaaagaaactctgcaggacatccagcctggttggatgctttgggctt
tttcagtacctgacaatggggattgatgcagctgatgccgtatacaatcatgccatccaa
aaactgattcccaccaacttgaattcagaagtgacagatgattctctgaggagatgcaag
gtctttgcagactgggagtctgttgctgtccagcgtgtagcactgctacgtcaccacacc
aacaccaatgtgtttcctctttcccggctaagactggcacttacagatgccatctcctta
ctgccctccagcgccttgttatggcatctctacctgcaaacagagaaccgctatcacagc
gcaggccgtgcccgaaggtttttccacagtgtggcaaagaaaactgacagtgttgtgcct
tatctattcgccatcactgcagaacgacgactcaaacagcttctggactcgcagaggtct
cgtcatcctggagaagctctcccgggccagtcagtgattggtcttagcaaccgtatccgc
tgtctgtttgaaactgctacagcaacagaacatggggcccattgtcctctgctgtggaga
atgtatctgaacttcatggtatgtgatgggactgcagagagtggcagtggaatcttctac
aaggctctacaggaagtgccctgggtaaagggcttgtacatggacgccgtgcagctgttt
cctgaacgtgtgcaagagattttagatcttatgactgagaaggagttacgtctgagagtg
cccatggaggaggtggacatcttgctggaggagtag
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integrated database retrieval system
