Rhinichthys klamathensis goyatoka (western speckled dace): 130076760
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Entry
130076760 CDS
T09701
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130076760
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130076760
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
zf-RING_2
U-box
Prok-RING_4
zf-Nse
Fib_alpha
Sina_RING
Myosin_tail_1
DUF4200
Apolipoprotein
DUF2175
zf-RING_4
ALMT
FUT8_N_cat
DUF1664
HJURP_C
FliD_N
zf-RING_10
DUF489
zf-ANAPC11
AAA_11
Exonuc_VII_L
End3
Histidinol_dh
Motif
Other DBs
NCBI-GeneID:
130076760
NCBI-ProteinID:
XP_056097951
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MDSKSVEELSCPVCFEIFKVPVFLSCSHSICKECLQQFWRTKKTQECPVCRRRSSNAHPP
VNLVLKNLCDSLIKEENEKRSSGSEEICSLHSEKLKLFCLEDKQPVCFVCINSEKHTNHT
FRPISEVLSSYKEEFNTALTSLQNKLKHGEEMKKKCDETIKHIESQAEHTERQIKEEFEK
LHQFLRDEEEATITALREEEEQKKKRMKEKLEEINTHISALSHTLRDMEEMMKDNDVSFL
KNYKVSMERVQISQPDPRMSSGALIHVWRYLGNLPFRVWKKMLETVQHTPVTLDPNTAAS
CLTLSADLTSVSYSRVGKTLPDNPERIDRYACVLGSEGFNSGTHCWDVEVGDNTYWTLGI
TTASNQRKGQVFFNSNVWCVRYKNSKYGSQSPEQPDTVFTVKQKLQRVRVQLDYDRGTVS
FSDPETNTHLLTFTHTFNDTVFPFLYNRCTTSPLRILPVKLFITAENHS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaaatctgtggaagagctttcttgtcctgtttgctttgaaatcttcaaggtt
cctgtttttctgtcctgtagtcacagtatttgtaaagagtgtctacaacagttctggaga
actaagaaaactcaggagtgtcctgtctgcaggagaagatcctcaaatgctcatcctcca
gtgaatctcgtgctaaaaaacttgtgtgattcattgataaaagaggaaaatgagaaacgt
tcatcaggatctgaggagatctgcagtttacacagtgagaaactcaaactcttctgtctg
gaggacaaacagcctgtgtgtttcgtgtgcataaactcagagaaacacaccaatcacaca
ttcagacccatcagtgaagtgctttcatcttacaaggaggaatttaatacagcactgacg
tccttacaaaacaagctcaaacatggagaagaaatgaagaaaaagtgtgatgaaacaatt
aaacacattgagtctcaagctgagcacacagagcgtcagattaaagaagagtttgagaag
cttcatcagtttctcagagacgaagaagaagctacaatcactgcactgagggaggaagag
gagcagaagaagaagaggatgaaggagaagctggaggagataaacacacacatctcagct
ctttcacacacactcagagacatggaggagatgatgaaagacaatgacgtctcgtttcta
aagaactataaagtctcgatggaaagagtccagatctcacagccggatccacggatgagt
tctggagctttgattcatgtgtggcgttatctgggtaacctgccgttcagagtctggaag
aagatgctggaaactgtccaacacactccggtgactctggatccaaacacagcagcttct
tgtctcacactctctgctgatctgaccagtgtgtcgtacagtcgtgtaggtaaaacactt
cctgataatccagagaggattgacaggtatgcatgtgtcctgggatctgagggctttaac
tcaggaacacactgctgggatgtggaggttggagacaatacatactggactcttggaata
accacagcatcaaaccaaaggaagggacaggttttctttaactctaatgtctggtgtgtg
cggtacaagaacagcaaatacggctcacaatccccagagcaaccagacactgtctttact
gttaaacagaagctccagcgtgtgagagttcagctggactatgacagaggaacagtgtca
ttctctgatcctgaaactaacacacatttactcacattcacacacaccttcaatgacaca
gtctttccattcttatataatcgctgcacaacttcccctctgaggatcttaccagttaaa
ctgtttattacagcagaaaatcacagttaa
DBGET
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