KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130076760
Entry
130076760         CDS       T09701                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
  KO
K12012  tripartite motif-containing protein 35
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rkg04121]
    130076760
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    130076760
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-B_box zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-C3HC4_4 zf-RING_2 U-box Prok-RING_4 zf-Nse Fib_alpha Sina_RING Myosin_tail_1 DUF4200 Apolipoprotein DUF2175 zf-RING_4 ALMT FUT8_N_cat DUF1664 HJURP_C FliD_N zf-RING_10 DUF489 zf-ANAPC11 AAA_11 Exonuc_VII_L End3 Histidinol_dh
Other DBs
NCBI-GeneID: 130076760
NCBI-ProteinID: XP_056097951
LinkDB
Position
Unknown
AA seq 469 aa
MDSKSVEELSCPVCFEIFKVPVFLSCSHSICKECLQQFWRTKKTQECPVCRRRSSNAHPP
VNLVLKNLCDSLIKEENEKRSSGSEEICSLHSEKLKLFCLEDKQPVCFVCINSEKHTNHT
FRPISEVLSSYKEEFNTALTSLQNKLKHGEEMKKKCDETIKHIESQAEHTERQIKEEFEK
LHQFLRDEEEATITALREEEEQKKKRMKEKLEEINTHISALSHTLRDMEEMMKDNDVSFL
KNYKVSMERVQISQPDPRMSSGALIHVWRYLGNLPFRVWKKMLETVQHTPVTLDPNTAAS
CLTLSADLTSVSYSRVGKTLPDNPERIDRYACVLGSEGFNSGTHCWDVEVGDNTYWTLGI
TTASNQRKGQVFFNSNVWCVRYKNSKYGSQSPEQPDTVFTVKQKLQRVRVQLDYDRGTVS
FSDPETNTHLLTFTHTFNDTVFPFLYNRCTTSPLRILPVKLFITAENHS
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggattcaaaatctgtggaagagctttcttgtcctgtttgctttgaaatcttcaaggtt
cctgtttttctgtcctgtagtcacagtatttgtaaagagtgtctacaacagttctggaga
actaagaaaactcaggagtgtcctgtctgcaggagaagatcctcaaatgctcatcctcca
gtgaatctcgtgctaaaaaacttgtgtgattcattgataaaagaggaaaatgagaaacgt
tcatcaggatctgaggagatctgcagtttacacagtgagaaactcaaactcttctgtctg
gaggacaaacagcctgtgtgtttcgtgtgcataaactcagagaaacacaccaatcacaca
ttcagacccatcagtgaagtgctttcatcttacaaggaggaatttaatacagcactgacg
tccttacaaaacaagctcaaacatggagaagaaatgaagaaaaagtgtgatgaaacaatt
aaacacattgagtctcaagctgagcacacagagcgtcagattaaagaagagtttgagaag
cttcatcagtttctcagagacgaagaagaagctacaatcactgcactgagggaggaagag
gagcagaagaagaagaggatgaaggagaagctggaggagataaacacacacatctcagct
ctttcacacacactcagagacatggaggagatgatgaaagacaatgacgtctcgtttcta
aagaactataaagtctcgatggaaagagtccagatctcacagccggatccacggatgagt
tctggagctttgattcatgtgtggcgttatctgggtaacctgccgttcagagtctggaag
aagatgctggaaactgtccaacacactccggtgactctggatccaaacacagcagcttct
tgtctcacactctctgctgatctgaccagtgtgtcgtacagtcgtgtaggtaaaacactt
cctgataatccagagaggattgacaggtatgcatgtgtcctgggatctgagggctttaac
tcaggaacacactgctgggatgtggaggttggagacaatacatactggactcttggaata
accacagcatcaaaccaaaggaagggacaggttttctttaactctaatgtctggtgtgtg
cggtacaagaacagcaaatacggctcacaatccccagagcaaccagacactgtctttact
gttaaacagaagctccagcgtgtgagagttcagctggactatgacagaggaacagtgtca
ttctctgatcctgaaactaacacacatttactcacattcacacacaccttcaatgacaca
gtctttccattcttatataatcgctgcacaacttcccctctgaggatcttaccagttaaa
ctgtttattacagcagaaaatcacagttaa

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