Rhinichthys klamathensis goyatoka (western speckled dace): 130077170
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Entry
130077170 CDS
T09701
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130077170 (trim16)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130077170 (trim16)
BRITE hierarchy
Motif
Pfam:
SPRY
PRY
zf-B_box
BshC
Motif
Other DBs
NCBI-GeneID:
130077170
NCBI-ProteinID:
XP_056098289
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MGDVVLTADLPTSSISLDKLKQKEDNLKSTEEEKTIQVNGSQETEGEKDSKITEESKIQE
DLQESEDPQKPQDEEPALGPDDVTCDSCIDRPCRAKKSCLTCLVSYCEDHLRPHLENVKF
QSHKLVEPLRDIERRTCETHRAPLELYCLADARCVCPECVREEHRGHNAVPITEARRNIE
KELHDKQTDMMKTVTAAENAINKLQVNTVSIEASVKDVRGVIEEQFDTLMLAVEQVKKEV
NEILEAEERQALRQAEGIRVHLEQRCTELKKTQGRVDKITKNKNDIDFLQEYSEWKKEAV
DVSLPGVYIGLMDQLQFFSRVITQSTKEMCANLITSYTNKLKETCKKDKMGIKTTVYAMI
AAKQNLSIPNPKTRDDFLRYATPLNLDEDSAHQFLRLTEERKKVTNTTPWQHSYPELPER
FEHFKQVLTVESFYMGRHYFEVDMRGEGTHIGLTYTSIDRKGSESNSCITGNSFSWCLTW
NGRGFSAWNSDVETPLSNPKASRIGVYVDYSAGELAFYDVENGMTLIHKYQAQFLEPLYP
AFWLPKKENVVLLEPAGAPSSLTGPSPVPSPQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgtggtgctcacagcagatctgccaacaagcagcataagtttagataaactc
aagcagaaggaggacaatctgaagtctacagaagaggagaagacgatccaggtgaatgga
tctcaagagacagaaggagaaaaggacagcaagatcaccgaggaaagcaagattcaagaa
gacctccaggaatcggaggacccccagaagccccaggacgaagagcccgcgctggggcca
gatgacgtcacgtgtgactcctgcatcgaccgaccgtgccgggccaaaaagtcgtgcttg
acctgcctggtgtcatactgtgaagatcacctgagaccacacctggagaacgtgaagttt
cagagccacaagctggtggagccgctgcgggacatcgagagacgcacgtgtgagacgcac
cgcgcgccgctcgagctctactgcctggccgacgcgcgctgcgtgtgcccggagtgcgtg
cgcgaggaacaccgcgggcacaacgccgtgcccatcacggaggcgcgcaggaacatagag
aaagagcttcatgacaaacagacagacatgatgaagacggtcacagcagcggaaaacgcc
attaacaagttacaggtcaacacggtgtctatagaggcgtctgtgaaggacgtgcgagga
gtgatcgaggagcagttcgacacactgatgctggccgtcgagcaggtgaagaaggaggtg
aacgagattctggaggccgaggaacgacaggcgctgaggcaggccgagggaatacgagtc
catctcgagcagcgctgcactgaactgaagaagactcagggtcgggtcgacaaaatcacc
aaaaacaaaaatgacatcgacttcctgcaggagtattccgagtggaaaaaggaagcggtt
gatgtgtctttacctggagtttatatcggcctcatggatcaactgcagttcttcagtcgt
gttatcacacagtccaccaaagagatgtgcgccaacctgattacctcttacaccaacaaa
ctcaaagagacctgcaaaaaagataaaatgggcataaagacgacggtttatgccatgatc
gctgcgaaacagaacctgtcaattcccaacccgaagaccagagacgacttcctccgatac
gccactcctctgaacctcgatgaggactcggctcatcagttcctgcgtctgacagaagag
cgtaagaaggtcacgaacacgaccccgtggcagcacagctatcccgagcttcccgagcgc
ttcgagcacttcaagcaggtgctgacggtcgagagcttctacatgggacgccactatttc
gaggtggacatgagaggagagggaactcacatcgggctgacgtacacgagcatcgaccgc
aagggatccgagagcaacagctgcatcacggggaacagcttctcctggtgtctgacgtgg
aacggccgagggttctccgcgtggaacagcgatgtggagacgccgctcagtaaccccaaa
gcctctcgcatcggcgtgtacgtggactactcggccggcgagcttgctttctacgacgtg
gagaacggcatgacgctcatacacaagtaccaggctcagttcctggagccgctttaccct
gcgttctggctccccaagaaggagaacgtggttctgctggagcctgcaggagcgccgtcg
tctctcacgggcccgtctccggttccctctccgcaataa
DBGET
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